Gm3211 Gene Detail

Summary

• Symbol
  Gm3211
• Name
  predicted gene 3211

• Feature Type
  lncRNA gene
• IDs
  MGI:3781390
  NCBI Gene: 100041218
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr9:79820482-79820913 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 43.84 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  171 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3781390	lncRNA gene	Chr9:79820482-79820913 (+)
129S1/SvImJ	ENSMUSG00200019324	lncRNA gene	Chr9:76921586-76922018 (+)
A/J	ENSMUSG00195010917	lncRNA gene	Chr9:76739003-76739434 (+)
AKR/J	ENSMUSG00220015398	lncRNA gene	Chr9:76838062-76838493 (+)
BALB/cJ	ENSMUSG00180019306	lncRNA gene	Chr9:76849654-76850085 (+)
C3H/HeJ	ENSMUSG00175012432	lncRNA gene	Chr9:76907948-76908379 (+)
C57BL/6NJ	ENSMUSG00215016434	lncRNA gene	Chr9:76816973-76817404 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013868	unclassified non-coding RNA gene	Chr9:76839998-76840427 (+)
CAST/EiJ	ENSTCUG00005010119	lncRNA gene	Chr9:76489198-76489630 (+)
CBA/J	ENSMUSG00210013367	lncRNA gene	Chr9:76939329-76939760 (+)
DBA/2J	ENSMUSG00185007781	lncRNA gene	Chr9:76967736-76968167 (+)
FVB/NJ	ENSMUSG00205029717	lncRNA gene	Chr9:77120310-77120741 (+)
JF1/MsJ	ENSUMUG00000039334	lncRNA gene	Chr9:76850228-76850660 (+)
LP/J	ENSMUSG00230025746	lncRNA gene	Chr9:77070533-77070965 (+)
NOD/ShiLtJ	ENSMUSG00190036050	lncRNA gene	Chr9:77043714-77044145 (+)
NZO/HlLtJ	ENSMUSG00225025595	lncRNA gene	Chr9:77265575-77266006 (+)
PWK/PhJ	ENSLUMG00010016184	lncRNA gene	Chr9:76799010-76799442 (+)
SPRET/EiJ	ENSMSPG00010004267	lncRNA gene	Chr9:78094709-78095141 (+)
WSB/EiJ	ENSIUOG00005026405	lncRNA gene	Chr9:76407806-76408237 (+)

Homology

• Gene Tree
  Gm3211
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  7 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm3211
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22

• Ensembl
  ENSMUSG00000092581 (Evidence)
• NCBI Gene
  100041218

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000092581	Ensembl Gene Model | MGI Sequence Detail	432	C57BL/6J
transcript	ENSMUST00000172721	Ensembl | MGI Sequence Detail	304	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 13

  Phenotypes 7
• Earliest
  J:12013 Russell LB, Definition of functional units in a small chromosomal segment of the mouse and its use in interpreting the nature of radiation-induced mutations. Mutat Res. 1971 Jan;11(1):107-23
• Latest
  J:29898 Avraham KB, et al., The mouse Snell's waltzer deafness gene encodes an unconventional myosin required for structural integrity of inner ear hair cells. Nat Genet. 1995 Dec;11(4):369-75