Gm3188 Pseudogene Detail

Summary

• Symbol
  Gm3188
• Name
  predicted gene 3188

• Feature Type
  pseudogene
• IDs
  MGI:3781367
  NCBI Gene: 100041185
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr19:13489917-13491375 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, 8.73 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  153 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3781367	pseudogene	Chr19:13489917-13492502 (-)
129S1/SvImJ	ENSMUSG00200020766	pseudogene	Chr19:10182547-10185118 (-)
A/J	ENSMUSG00195019286	pseudogene	Chr19:10318142-10320727 (-)
AKR/J	ENSMUSG00220010829	pseudogene	Chr19:10292663-10295264 (-)
BALB/cJ	ENSMUSG00180018476	pseudogene	Chr19:10682717-10685306 (-)
C3H/HeJ	ENSMUSG00175004021	pseudogene	Chr19:10057867-10060449 (-)
C57BL/6NJ	ENSMUSG00215023103	pseudogene	Chr19:10093344-10095927 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005045312	pseudogene	Chr19:9874377-9876999 (-)
CBA/J	ENSMUSG00210012947	pseudogene	Chr19:10256381-10258969 (-)
DBA/2J	ENSMUSG00185013865	pseudogene	Chr19:10665646-10668232 (-)
FVB/NJ	ENSMUSG00205003856	pseudogene	Chr19:10100746-10103340 (-)
JF1/MsJ	ENSUMUG00000037517	pseudogene	Chr19:10780408-10783031 (-)
LP/J	ENSMUSG00230021510	pseudogene	Chr19:11550184-11552768 (-)
NOD/ShiLtJ	ENSMUSG00190020582	pseudogene	Chr19:10042561-10045146 (-)
NZO/HlLtJ	ENSMUSG00225046473	pseudogene	Chr19:15259210-15261793 (-)
PWK/PhJ	ENSLUMG00010008721	pseudogene	Chr19:10119382-10121983 (-)
SPRET/EiJ	ENSMSPG00010019025	pseudogene	Chr19:10071718-10074221 (-)
WSB/EiJ	ENSIUOG00005051380	pseudogene	Chr19:9769109-9771689 (-)

Homology

• Gene Tree
  Gm3188
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000118174 (Evidence)
• NCBI Gene
  100041185

Representative Sequences			Length	Strain/Species
genomic	100041185	NCBI Gene Model | MGI Sequence Detail	1459	C57BL/6J

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;