Iqcf6 MGI Mouse Gene Detail - MGI:3781315

Sequence Map

Chr9:106503800-106504874 bp, + strand
From NCBI annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3781315	protein coding gene	Chr9:106503180-106504874 (+)
129S1/SvImJ	ENSMUSG00200040741	protein coding gene	Chr9:103695884-103697578 (+)
A/J	ENSMUSG00195035240	protein coding gene	Chr9:102920897-102922591 (+)
AKR/J	ENSMUSG00220021489	protein coding gene	Chr9:103310793-103312487 (+)
BALB/cJ	ENSMUSG00180023468	protein coding gene	Chr9:103237363-103239057 (+)
C3H/HeJ	ENSMUSG00175036007	protein coding gene	Chr9:103579737-103581431 (+)
C57BL/6NJ	ENSMUSG00215035901	protein coding gene	Chr9:103552772-103554466 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0032631	protein coding gene	Chr9:101999374-102000467 (+)
CAST/EiJ	ENSTCUG00005023223	protein coding gene	Chr9:103340900-103342594 (+)
CBA/J	ENSMUSG00210027963	protein coding gene	Chr9:103423110-103424804 (+)
DBA/2J	ENSMUSG00185033290	protein coding gene	Chr9:103587652-103589346 (+)
FVB/NJ	ENSMUSG00205048193	protein coding gene	Chr9:103591446-103593140 (+)
JF1/MsJ	ENSUMUG00000041261	protein coding gene	Chr9:103410851-103412545 (+)
LP/J	ENSMUSG00230044021	protein coding gene	Chr9:103731203-103732883 (+)
NOD/ShiLtJ	ENSMUSG00190037306	protein coding gene	Chr9:103222795-103224489 (+)
NZO/HlLtJ	ENSMUSG00225024345	protein coding gene	Chr9:103965317-103966997 (+)
PWK/PhJ	ENSLUMG00010027398	protein coding gene	Chr9:103357115-103358809 (+)
SPRET/EiJ	ENSMSPG00010042708	protein coding gene	Chr9:105215385-105217078 (+)
WSB/EiJ	ENSIUOG00005037447	protein coding gene	Chr9:102663247-102664941 (+)

Vertebrate Orthology Source

Alliance of Genome Resources

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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			Length	Strain/Species	Flank
genomic	100041096	NCBI Gene Model \| MGI Sequence Detail	1075	C57BL/6J	± kb
transcript	NM_001101628	RefSeq \| MGI Sequence Detail	518	C57BL/6
polypeptide	NP_001095098	RefSeq \| MGI Sequence Detail	146	C57BL/6

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UniProt

2 Sequences
InterPro Domains

IPR039887 IQ domain-containing protein F

IPR000048 IQ motif, EF-hand binding site

TSS for Iqcf6:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr86931	Chr9:106503798-106503812 (+)	5 bp

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 09/08/2026 MGI 6.24