Gm3131 Pseudogene Detail

Summary

• Symbol
  Gm3131
• Name
  predicted gene 3131

• Feature Type
  pseudogene
• IDs
  MGI:3781308
  NCBI Gene: 100041086
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:58694003-58694194 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 31.07 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  135 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3781308	pseudogene	Chr13:58693842-58694316 (+)
129S1/SvImJ	ENSMUSG00200017252	pseudogene	Chr13:55576496-55576970 (+)
A/J	ENSMUSG00195045248	pseudogene	Chr13:55052766-55053240 (+)
AKR/J	ENSMUSG00220045342	pseudogene	Chr13:54589702-54590176 (+)
BALB/cJ	ENSMUSG00180016981	pseudogene	Chr13:55307024-55307498 (+)
C3H/HeJ	ENSMUSG00175046126	pseudogene	Chr13:55093147-55093621 (+)
C57BL/6NJ	ENSMUSG00215039569	pseudogene	Chr13:55100776-55101250 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005041543	pseudogene	Chr13:55477811-55478279 (+)
CBA/J	ENSMUSG00210041855	pseudogene	Chr13:55298074-55298548 (+)
DBA/2J	ENSMUSG00185017243	pseudogene	Chr13:56136729-56137203 (+)
FVB/NJ	ENSMUSG00205044707	pseudogene	Chr13:54915611-54916085 (+)
JF1/MsJ	ENSUMUG00000035890	pseudogene	Chr13:55509882-55510556 (+)
LP/J	ENSMUSG00230034103	pseudogene	Chr13:65484805-65485279 (+)
NOD/ShiLtJ	ENSMUSG00190037204	pseudogene	Chr13:55154120-55154594 (+)
NZO/HlLtJ	ENSMUSG00225034645	pseudogene	Chr13:59197280-59197754 (+)
PWK/PhJ	ENSLUMG00010023283	pseudogene	Chr13:54432265-54432739 (+)
SPRET/EiJ	ENSMSPG00010043464	pseudogene	Chr13:54795223-54795690 (+)
WSB/EiJ	ENSIUOG00005027059	pseudogene	Chr13:54615556-54616030 (+)

Homology

• Gene Tree
  Gm3131
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm3131
• Find Mice (IMSR)
  4 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000114234 (Evidence)
• NCBI Gene
  100041086

Representative Sequences			Length	Strain/Species
genomic	100041086	NCBI Gene Model | MGI Sequence Detail	192	C57BL/6J

References

• Summaries
  All 8

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
• Latest
  J:80507 Waterston RH, et al., Initial sequencing and comparative analysis of the mouse genome. Nature. 2002 Dec 5;420(6915):520-62