Gm3086 Pseudogene Detail

Summary

• Symbol
  Gm3086
• Name
  predicted gene 3086

• Feature Type
  pseudogene
  BioType Conflict
  
• IDs
  MGI:3781262
  NCBI Gene: 100040999
• Alliance
  genome feature page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr12:70010183-70016518 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 28.94 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  210 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3781262	pseudogene	Chr12:70010183-70016518 (+)
129S1/SvImJ	ENSMUSG00200032517	pseudogene	Chr12:61930077-61936404 (+)
A/J	ENSMUSG00195014855	pseudogene	Chr12:64627347-64633674 (+)
AKR/J	ENSMUSG00220015087	pseudogene	Chr12:62427974-62434301 (+)
BALB/cJ	ENSMUSG00180033821	pseudogene	Chr12:63626402-63632730 (+)
C3H/HeJ	ENSMUSG00175030117	pseudogene	Chr12:66720819-66727146 (+)
C57BL/6NJ	ENSMUSG00215034134	pseudogene	Chr12:62999314-63005641 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0017814	protein coding gene	Chr12:64626681-64633068 (+)
CAST/EiJ	ENSTCUG00005036850	pseudogene	Chr12:62958754-62965073 (+)
CBA/J	ENSMUSG00210031720	pseudogene	Chr12:63190837-63197164 (+)
DBA/2J	ENSMUSG00185004940	pseudogene	Chr12:65090220-65096547 (+)
FVB/NJ	ENSMUSG00205036108	pseudogene	Chr12:62832328-62838655 (+)
JF1/MsJ	ENSUMUG00000032319	pseudogene	Chr12:69048878-69055209 (+)
LP/J	ENSMUSG00230022811	pseudogene	Chr12:72055650-72061977 (+)
NOD/ShiLtJ	ENSMUSG00190012380	pseudogene	Chr12:62244396-62250723 (+)
NZO/HlLtJ	ENSMUSG00225038465	pseudogene	Chr12:74132116-74138443 (+)
PWK/PhJ	ENSLUMG00010031958	pseudogene	Chr12:63124460-63131013 (+)
SPRET/EiJ	ENSMSPG00010031319	pseudogene	Chr12:64809000-64815337 (+)
WSB/EiJ	ENSIUOG00005012959	pseudogene	Chr12:62876998-62883361 (+)

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm3086
• Find Mice (IMSR)
  2 strains or lines available

Expression

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  28
• RefSeq
  1
• UniProt
  1

• Ensembl
  ENSMUSG00000079076 (Evidence), ENSMUSG00000121663 (Evidence)
• NCBI Gene
  100040999

Representative Sequences			Length	Strain/Species
genomic	100040999	NCBI Gene Model | MGI Sequence Detail	6336	C57BL/6J
transcript	NR_036607	RefSeq | MGI Sequence Detail	628	C57BL/6
polypeptide	Q05CB6	UniProt | EBI | MGI Sequence Detail	67	Not Applicable

Protein
Information

• UniProt
  1 Sequence
• EC
  3.6.4.12
• InterPro Domains
  IPR027238 RuvB-like
  IPR041048 RuvB-like, AAA-lid domain

Molecular
Reagents

• 
  

  Microarray probesets 1

References

• Summaries
  All 10

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm3086:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr113669	Chr12:70010186-70010214 (+)	17 bp
Tssr113670	Chr12:70010226-70010248 (+)	54 bp