Gm2926 Pseudogene Detail

Summary

• Symbol
  Gm2926
• Name
  predicted gene 2926

• Feature Type
  pseudogene
• IDs
  MGI:3781104
  NCBI Gene: 100040721
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr7:98104467-98104705 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 53.86 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  153 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3781104	pseudogene	Chr7:98104300-98104884 (+)
129S1/SvImJ	ENSMUSG00200050377	pseudogene	Chr7:84922691-84922930 (+)
A/J	ENSMUSG00195040524	pseudogene	Chr7:89427650-89427889 (+)
AKR/J	ENSMUSG00220051140	pseudogene	Chr7:82844951-82845190 (+)
BALB/cJ	ENSMUSG00180035378	pseudogene	Chr7:86101054-86101293 (+)
C3H/HeJ	ENSMUSG00175025412	pseudogene	Chr7:86748639-86748878 (+)
C57BL/6NJ	ENSMUSG00215037129	pseudogene	Chr7:85947624-85947862 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012226	pseudogene	Chr7:101124799-101125034 (+)
CAST/EiJ	ENSTCUG00005033060	pseudogene	Chr7:89332298-89332536 (+)
CBA/J	ENSMUSG00210025727	pseudogene	Chr7:86596562-86596801 (+)
DBA/2J	ENSMUSG00185056893	pseudogene	Chr7:90923329-90923568 (+)
FVB/NJ	ENSMUSG00205038525	pseudogene	Chr7:86599396-86599635 (+)
JF1/MsJ	ENSUMUG00000049475	pseudogene	Chr7:95829256-95829495 (+)
LP/J	ENSMUSG00230045104	pseudogene	Chr7:97039650-97039889 (+)
NOD/ShiLtJ	ENSMUSG00190023320	pseudogene	Chr7:86874254-86874493 (+)
NZO/HlLtJ	ENSMUSG00225051319	pseudogene	Chr7:95226121-95226360 (+)
PWK/PhJ	ENSLUMG00010050366	pseudogene	Chr7:85052090-85052329 (+)
SPRET/EiJ	ENSMSPG00010012485	pseudogene	Chr7:86283369-86283604 (+)
WSB/EiJ	ENSIUOG00005010751	pseudogene	Chr7:87215392-87215631 (+)

Homology

• Gene Tree
  Gm2926
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  9 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm2926
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000108764 (Evidence)
• NCBI Gene
  100040721

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108764	Ensembl Gene Model | MGI Sequence Detail	239	C57BL/6J
transcript	ENSMUST00000205625	Ensembl | MGI Sequence Detail	239	Not Applicable

References

• Summaries
  All 14

  Phenotypes 9
• Earliest
  J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55
• Latest
  J:123187 Cohen-Barak O, et al., Stem cell transplantation demonstrates that Sox6 represses epsilon y globin expression in definitive erythropoiesis of adult mice. Exp Hematol. 2007 Mar;35(3):358-67

TSS for Gm2926:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr68013	Chr7:98104313-98104347 (+)	-137 bp