Gm2869 Pseudogene Detail

Summary

• Symbol
  Gm2869
• Name
  predicted gene 2869

• Feature Type
  pseudogene
• IDs
  MGI:3781046
  NCBI Gene: 100040619
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr8:21590667-21593287 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, 10.35 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  107 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3781046	pseudogene	Chr8:21590503-21593287 (+)
129S1/SvImJ	ENSMUSG00200032765	pseudogene	Chr8:16964659-16967281 (+)
A/J	ENSMUSG00195043443	pseudogene	Chr8:17498807-17501429 (+)
AKR/J	ENSMUSG00220033964	pseudogene	Chr8:17415503-17418127 (+)
BALB/cJ	ENSMUSG00180027851	pseudogene	Chr8:17040947-17043569 (+)
C3H/HeJ	ENSMUSG00175039250	pseudogene	Chr8:17253177-17255799 (+)
C57BL/6NJ	ENSMUSG00215031674	pseudogene	Chr8:17152544-17155163 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005019654	pseudogene	Chr8:17552215-17552710 (+)
CBA/J	ENSMUSG00210042495	pseudogene	Chr8:17040402-17043024 (+)
DBA/2J	ENSMUSG00185038935	pseudogene	Chr8:22843327-22845949 (+)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000030122	pseudogene	Chr8:24762050-24764670 (+)
JF1/MsJ	ENSUMUG00000032759	pseudogene	Chr8:25012990-25015612 (+)
LP/J	ENSMUSG00230011845	pseudogene	Chr8:26639235-26641855 (+)
LP/J	ENSMUSG00230011833	pseudogene	Chr8:26502691-26505311 (+)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	ENSMUSG00225042231	pseudogene	Chr8:29886958-29889578 (+)
PWK/PhJ	no annotation
SPRET/EiJ	ENSMSPG00010014341	pseudogene	Chr8:17286643-17290430 (+)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm2869
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Endonuclease-mediated
  1
• Genomic Mutations
  1 involving Gm2869
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  1

• Ensembl
  ENSMUSG00000085173 (Evidence)
• NCBI Gene
  100040619

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000085173	Ensembl Gene Model | MGI Sequence Detail	2621	C57BL/6J
transcript	ENSMUST00000124359	Ensembl | MGI Sequence Detail	2621	Not Applicable

References

• Summaries
  All 6

  Phenotypes 1
• Earliest
  J:332494 Dong X, et al., Keratinocyte-derived defensins activate neutrophil-specific receptors Mrgpra2a/b to prevent skin dysbiosis and bacterial infection. Immunity. 2022 Jul 15;55(9):1645-1662