Gm2645 Pseudogene Detail

Summary

• Symbol
  Gm2645
• Name
  predicted gene 2645

• Feature Type
  pseudogene
• IDs
  MGI:3780813
  NCBI Gene: 100040176
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:50361578-50362124 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 25.62 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  92 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3780813	pseudogene	Chr13:50360821-50362135 (-)
129S1/SvImJ	ENSMUSG00200036294	pseudogene	Chr13:47490531-47491077 (-)
A/J	ENSMUSG00195030913	pseudogene	Chr13:47086612-47087158 (+)
AKR/J	no annotation
BALB/cJ	ENSMUSG00180009170	pseudogene	Chr13:46976684-46977230 (-)
C3H/HeJ	ENSMUSG00175029760	pseudogene	Chr13:47141239-47141785 (+)
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005032838	pseudogene	Chr13:47518137-47518683 (+)
CBA/J	ENSMUSG00210028591	pseudogene	Chr13:46968972-46969518 (-)
DBA/2J	ENSMUSG00185032655	pseudogene	Chr13:47783080-47783626 (-)
FVB/NJ	ENSMUSG00205013273	pseudogene	Chr13:47159552-47159647 (+)
JF1/MsJ	ENSUMUG00000019998	pseudogene	Chr13:47577367-47577913 (+)
LP/J	ENSMUSG00230029508	pseudogene	Chr13:57103852-57104398 (-)
NOD/ShiLtJ	ENSMUSG00190012907	pseudogene	Chr13:46895033-46895579 (-)
NZO/HlLtJ	ENSMUSG00225036595	pseudogene	Chr13:50854281-50854827 (-)
PWK/PhJ	ENSLUMG00010022318	pseudogene	Chr13:46100748-46101294 (-)
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm2645
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm2645
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18
• RefSeq
  1

• Ensembl
  ENSMUSG00000113718 (Evidence)
• NCBI Gene
  100040176

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000113718	Ensembl Gene Model | MGI Sequence Detail	547	C57BL/6J
transcript	ENSMUST00000223516	Ensembl | MGI Sequence Detail	547	Not Applicable

References

• Summaries
  All 7

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69