Gm2518 Pseudogene Detail

Summary

• Symbol
  Gm2518
• Name
  predicted gene 2518
• Synonyms
  D630022E15Rik

• Feature Type
  pseudogene
• IDs
  MGI:3780685
  NCBI Gene: 100039957
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr19:8753630-8753924 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, 5.56 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  53 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3780685	pseudogene	Chr19:8751849-8754326 (+)
129S1/SvImJ	ENSMUSG00200053284	pseudogene	Chr19:5479367-5479661 (+)
A/J	ENSMUSG00195054135	pseudogene	Chr19:5880871-5881165 (+)
AKR/J	ENSMUSG00220051306	pseudogene	Chr19:5654099-5654393 (+)
BALB/cJ	ENSMUSG00180051483	pseudogene	Chr19:6244851-6245145 (+)
C3H/HeJ	ENSMUSG00175014665	pseudogene	Chr19:5518611-5518905 (+)
C57BL/6NJ	ENSMUSG00215047946	pseudogene	Chr19:5719814-5720108 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005044884	pseudogene	Chr19:5356901-5357195 (+)
CBA/J	ENSMUSG00210050634	pseudogene	Chr19:5534382-5534676 (+)
DBA/2J	ENSMUSG00185053861	pseudogene	Chr19:5889071-5889365 (+)
FVB/NJ	ENSMUSG00205053646	pseudogene	Chr19:5576805-5577099 (+)
JF1/MsJ	ENSUMUG00000056259	pseudogene	Chr19:6126448-6126733 (+)
LP/J	ENSMUSG00230054357	pseudogene	Chr19:6806025-6806319 (+)
NOD/ShiLtJ	ENSMUSG00190052683	pseudogene	Chr19:5414418-5414712 (+)
NZO/HlLtJ	ENSMUSG00225046762	pseudogene	Chr19:10514820-10515114 (+)
PWK/PhJ	ENSLUMG00010008504	pseudogene	Chr19:5562713-5562998 (+)
SPRET/EiJ	ENSMSPG00010051295	pseudogene	Chr19:5468410-5468715 (+)
WSB/EiJ	ENSIUOG00005051033	pseudogene	Chr19:5243117-5243411 (+)

Homology

• Gene Tree
  Gm2518
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Gene trapped
  1
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  4

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  26
• RefSeq
  1

• Ensembl
  ENSMUSG00000118261 (Evidence)
• NCBI Gene
  100039957

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000118261	Ensembl Gene Model | MGI Sequence Detail	295	C57BL/6J
transcript	ENSMUST00000237579	Ensembl | MGI Sequence Detail	295	Not Applicable

Molecular
Reagents

• All nucleic 4

  cDNA 4

Other
Accession IDs

MGI:3697398

References

• Summaries
  All 8

  Phenotypes 1
• Earliest
  J:321899 Park H, et al., Non-coding RNA Neat1 and Abhd11os expressions are dysregulated in medium spiny neurons of Huntington disease model mice. Neurosci Res. 2019 Oct;147:58-63