About   Help   FAQ
Siglecl1 Gene Detail
Summary
  • Symbol
    Siglecl1
  • Name
    Siglec family like 1
  • Synonyms
    Gm2511
Location &
Maps
more
  • Sequence Map
    Chr7:43160588-43168443 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    404 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3780678
 protein coding gene Chr7:43160588-43172609 (-)
129S1/SvImJ ENSMUSG00200033273
 lncRNA gene Chr7:30746210-30754015 (-)
A/J ENSMUSG00195050833
 lncRNA gene Chr7:34786352-34794157 (-)
AKR/J ENSMUSG00220053715
 lncRNA gene Chr7:29084435-29092240 (-)
BALB/cJ ENSMUSG00180045392
 lncRNA gene Chr7:31661838-31669643 (-)
C3H/HeJ ENSMUSG00175042085
 lncRNA gene Chr7:32182166-32189971 (-)
C57BL/6NJ ENSMUSG00215046317
 lncRNA gene Chr7:31451978-31459783 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0006523
 lincRNA gene Chr7:44759435-44766027 (-)
CAST/EiJ ENSTCUG00005047904
 lncRNA gene Chr7:35170582-35178429 (-)
CBA/J ENSMUSG00210050181
 lncRNA gene Chr7:32558918-32566723 (-)
DBA/2J ENSMUSG00185051383
 lncRNA gene Chr7:36422332-36430130 (-)
FVB/NJ ENSMUSG00205047838
 lncRNA gene Chr7:32104105-32111911 (-)
JF1/MsJ ENSUMUG00000053428
 lncRNA gene Chr7:40909286-40917085 (-)
LP/J ENSMUSG00230051668
 lncRNA gene Chr7:41865896-41873708 (-)
NOD/ShiLtJ ENSMUSG00190052028
 lncRNA gene Chr7:32425811-32433616 (-)
NZO/HlLtJ ENSMUSG00225010565
 lncRNA gene Chr7:40071920-40079927 (-)
PWK/PhJ ENSLUMG00010051270
 lncRNA gene Chr7:31336448-31344247 (-)
SPRET/EiJ ENSMSPG00010044114
 lncRNA gene Chr7:31142073-31149902 (-)
WSB/EiJ ENSIUOG00005031802
 lncRNA gene Chr7:32994471-33002280 (-)



Homology
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    4
Sequences &
Gene Models
less
  • All Sequences
    63
  • RefSeq
    24
  • UniProt
    5
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000108695 Ensembl Gene Model | MGI Sequence Detail 7856 C57BL/6J ±  kb
transcript ENSMUST00000206605 Ensembl | MGI Sequence Detail 853 Not Applicable  
polypeptide ENSMUSP00000160090 Ensembl | MGI Sequence Detail 226 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    5 Sequences
  • InterPro Domains
    IPR036179 Immunoglobulin-like domain superfamily
    IPR013783 Immunoglobulin-like fold
    IPR051036 Sialic acid-binding Ig-like lectin
    IPR061941 Sialic acid binding Ig-like lectin, C-terminal domain
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 1
Other
Accession IDs
less
MGI:6435195
References
more
  • Summaries
    All 13
    Gene Ontology 1
  • Earliest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory