Gm2424 Pseudogene Detail

Summary

• Symbol
  Gm2424
• Name
  predicted gene 2424

• Feature Type
  pseudogene
• IDs
  MGI:3780590
  NCBI Gene: 100039787
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:9909196-9910499 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, 4.91 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  155 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3780590	pseudogene	Chr18:9909193-9910499 (+)
129S1/SvImJ	ENSMUSG00200025802	pseudogene	Chr18:6859876-6860122 (+)
A/J	ENSMUSG00195008929	pseudogene	Chr18:7018937-7020242 (+)
AKR/J	ENSMUSG00220019947	pseudogene	Chr18:7010107-7011413 (+)
BALB/cJ	ENSMUSG00180005544	pseudogene	Chr18:7466085-7467390 (+)
C3H/HeJ	ENSMUSG00175008137	pseudogene	Chr18:7001445-7002750 (+)
C57BL/6NJ	ENSMUSG00215023155	pseudogene	Chr18:6745733-6747038 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210022037	pseudogene	Chr18:7014334-7015639 (+)
DBA/2J	ENSMUSG00185031909	pseudogene	Chr18:7024041-7025346 (+)
FVB/NJ	ENSMUSG00205036582	pseudogene	Chr18:6803231-6804535 (+)
JF1/MsJ	ENSUMUG00000042715	pseudogene	Chr18:7103440-7103686 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190010547	pseudogene	Chr18:6796843-6798148 (+)
NZO/HlLtJ	ENSMUSG00225034237	pseudogene	Chr18:9007510-9008815 (+)
PWK/PhJ	ENSLUMG00010010315	pseudogene	Chr18:7292174-7292420 (+)
SPRET/EiJ	ENSMSPG00010012120	pseudogene	Chr18:6929110-6930008 (+)
WSB/EiJ	ENSIUOG00005027620	pseudogene	Chr18:6875206-6876511 (+)

Homology

• Gene Tree
  Gm2424
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  1

• Ensembl
  ENSMUSG00000117453 (Evidence)
• NCBI Gene
  100039787

Representative Sequences			Length	Strain/Species
genomic	100039787	NCBI Gene Model | MGI Sequence Detail	1304	C57BL/6J

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;