Gm2387 Pseudogene Detail

Summary

• Symbol
  Gm2387
• Name
  predicted gene 2387

• Feature Type
  pseudogene
• IDs
  MGI:3780555
  NCBI Gene: 100039720
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:51952704-51953349 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, 19.55 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  174 from dbSNP Build 142
• Strain Annotations
  15

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3780555	pseudogene	Chr15:51952663-51953421 (+)
129S1/SvImJ	ENSMUSG00200019405	pseudogene	Chr15:48948066-48948711 (+)
A/J	ENSMUSG00195005767	pseudogene	Chr15:48956561-48957206 (+)
AKR/J	ENSMUSG00220018103	pseudogene	Chr15:48950972-48951617 (+)
BALB/cJ	ENSMUSG00180004892	pseudogene	Chr15:48916248-48916893 (+)
C3H/HeJ	ENSMUSG00175020527	pseudogene	Chr15:49138523-49139168 (+)
C57BL/6NJ	ENSMUSG00215003260	pseudogene	Chr15:48910756-48911401 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210026547	pseudogene	Chr15:49019616-49020261 (+)
DBA/2J	ENSMUSG00185013171	pseudogene	Chr15:48990878-48991523 (+)
FVB/NJ	ENSMUSG00205015315	pseudogene	Chr15:48807150-48807795 (+)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230008805	pseudogene	Chr15:52308854-52309499 (+)
NOD/ShiLtJ	ENSMUSG00190008549	pseudogene	Chr15:48965445-48966090 (+)
NZO/HlLtJ	ENSMUSG00225024868	pseudogene	Chr9:102881083-102881727 (-)
NZO/HlLtJ	ENSMUSG00225028817	pseudogene	Chr15:52622088-52622733 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005021836	pseudogene	Chr15:48993200-48993845 (+)

Homology

• Gene Tree
  Gm2387
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  2
• Genomic Mutations
  2 involving Gm2387
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19
• RefSeq
  1

• Ensembl
  ENSMUSG00000115457 (Evidence)
• NCBI Gene
  100039720

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000115457	Ensembl Gene Model | MGI Sequence Detail	646	C57BL/6J
transcript	ENSMUST00000227885	Ensembl | MGI Sequence Detail	646	Not Applicable

References

• Summaries
  All 9

  Phenotypes 5
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6