Gm2333 Pseudogene Detail

Summary

• Symbol
  Gm2333
• Name
  predicted gene 2333

• Feature Type
  pseudogene
• IDs
  MGI:3780503
  NCBI Gene: 100039600
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:48994019-48994360 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, 18.56 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  136 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3780503	pseudogene	Chr15:48994004-48994555 (-)
129S1/SvImJ	ENSMUSG00200019494	pseudogene	Chr15:45946786-45947127 (-)
A/J	ENSMUSG00195005669	pseudogene	Chr15:45938201-45938542 (-)
AKR/J	ENSMUSG00220018237	pseudogene	Chr15:45896125-45896466 (-)
BALB/cJ	ENSMUSG00180004910	pseudogene	Chr15:45929309-45929650 (-)
C3H/HeJ	ENSMUSG00175020799	pseudogene	Chr15:46146698-46147039 (-)
C57BL/6NJ	ENSMUSG00215003251	pseudogene	Chr15:45936416-45936757 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005014218	pseudogene	Chr15:45865125-45865466 (-)
CBA/J	ENSMUSG00210026674	pseudogene	Chr15:46027871-46028212 (-)
DBA/2J	ENSMUSG00185013203	pseudogene	Chr15:45992123-45992464 (-)
FVB/NJ	ENSMUSG00205015885	pseudogene	Chr15:45918203-45918544 (-)
JF1/MsJ	ENSUMUG00000024134	pseudogene	Chr15:45846050-45846389 (-)
LP/J	ENSMUSG00230014853	pseudogene	Chr15:49317764-49318105 (-)
NOD/ShiLtJ	ENSMUSG00190008510	pseudogene	Chr15:45989606-45989947 (-)
NZO/HlLtJ	ENSMUSG00225038235	pseudogene	Chr15:49663035-49663376 (-)
PWK/PhJ	ENSLUMG00010012470	pseudogene	Chr15:46060082-46060421 (-)
SPRET/EiJ	ENSMSPG00010006924	pseudogene	Chr15:47013439-47013776 (-)
WSB/EiJ	ENSIUOG00005021175	pseudogene	Chr15:46001190-46001531 (-)

Homology

• Gene Tree
  Gm2333
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  2
• Genomic Mutations
  2 involving Gm2333
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000114976 (Evidence)
• NCBI Gene
  100039600

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000114976	Ensembl Gene Model | MGI Sequence Detail	342	C57BL/6J
transcript	ENSMUST00000227927	Ensembl | MGI Sequence Detail	342	Not Applicable

References

• Summaries
  All 9

  Phenotypes 5
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6