Gm2270 Gene Detail

Summary

• Symbol
  Gm2270
• Name
  predicted gene 2270

• Feature Type
  lncRNA gene
• IDs
  MGI:3780440
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:90330981-90334454 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  90 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3780440	lncRNA gene	Chr12:90330981-90334454 (+)
129S1/SvImJ	ENSMUSG00200017948	lncRNA gene	Chr12:82121789-82125215 (+)
A/J	ENSMUSG00195035641	lncRNA gene	Chr12:84757311-84760737 (+)
AKR/J	ENSMUSG00220018226	lncRNA gene	Chr12:82418639-82422065 (+)
BALB/cJ	ENSMUSG00180016577	lncRNA gene	Chr12:83801599-83805025 (+)
C3H/HeJ	ENSMUSG00175039646	lncRNA gene	Chr12:86525003-86528429 (+)
C57BL/6NJ	ENSMUSG00215018678	lncRNA gene	Chr12:83100477-83103903 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005006401	lncRNA gene	Chr12:82967443-82970861 (+)
CBA/J	ENSMUSG00210019053	lncRNA gene	Chr12:83528662-83532088 (+)
DBA/2J	ENSMUSG00185002961	lncRNA gene	Chr12:85352426-85355852 (+)
FVB/NJ	ENSMUSG00205000710	lncRNA gene	Chr12:82741682-82745108 (+)
JF1/MsJ	ENSUMUG00000052801	lncRNA gene	Chr12:90030200-90033618 (+)
LP/J	ENSMUSG00230005098	lncRNA gene	Chr12:92438502-92441928 (+)
NOD/ShiLtJ	ENSMUSG00190042269	lncRNA gene	Chr12:102624185-102627611 (-)
NZO/HlLtJ	ENSMUSG00225034264	lncRNA gene	Chr12:94206676-94210102 (+)
PWK/PhJ	ENSLUMG00010003726	lncRNA gene	Chr12:83506769-83510191 (+)
SPRET/EiJ	ENSMSPG00010001228	lncRNA gene	Chr12:85855276-85855757 (+)
WSB/EiJ	ENSIUOG00005002273	lncRNA gene	Chr12:82729234-82732660 (+)

Homology

• Gene Tree
  Gm2270
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22

• Ensembl
  ENSMUSG00000113884 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000113884	Ensembl Gene Model | MGI Sequence Detail	3474	C57BL/6J
transcript	ENSMUST00000222858	Ensembl | MGI Sequence Detail	840	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;