Gm2178 Pseudogene Detail

Summary

• Symbol
  Gm2178
• Name
  predicted gene 2178

• Feature Type
  pseudogene
• IDs
  MGI:3780348
  NCBI Gene: 100039353
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr14:26235709-26236065 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, 16.09 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  14 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3780348	pseudogene	Chr14:26235673-26236092 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0021081	protein coding gene	Chr14:19489237-19489593 (+)
A/J	MGP_AJ_G0021030	protein coding gene	Chr14:18718330-18718686 (+)
AKR/J	MGP_AKRJ_G0021007	protein coding gene	Chr14:19745595-19745951 (+)
BALB/cJ	MGP_BALBcJ_G0021033	protein coding gene	Chr14:18827562-18827918 (+)
C3H/HeJ	MGP_C3HHeJ_G0020817	protein coding gene	Chr14:19607970-19608326 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0021466	protein coding gene	Chr14:20304231-20304587 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0019029	protein coding gene	Chr14:18875429-18875783 (+)
CAST/EiJ	MGP_CASTEiJ_G0020341	protein coding gene	Chr14:19212492-19212848 (+)
CBA/J	MGP_CBAJ_G0020783	protein coding gene	Chr14:21127379-21127735 (+)
DBA/2J	MGP_DBA2J_G0020906	protein coding gene	Chr14:18803437-18803793 (+)
FVB/NJ	MGP_FVBNJ_G0020889	protein coding gene	Chr14:18769089-18769445 (+)
LP/J	MGP_LPJ_G0020974	protein coding gene	Chr14:19758905-19759261 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0020915	protein coding gene	Chr14:20452982-20453338 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0021499	protein coding gene	Chr14:19512664-19513020 (+)
PWK/PhJ	MGP_PWKPhJ_G0020090	protein coding gene	Chr14:18172026-18172382 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0019913	protein coding gene	Chr14:18985663-18986019 (+)
WSB/EiJ	MGP_WSBEiJ_G0020397	protein coding gene	Chr14:19554013-19554369 (+)

Homology

• Gene Tree
  Gm2178
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000078128 (Evidence)
• NCBI Gene
  100039353

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000078128	Ensembl Gene Model | MGI Sequence Detail	357	C57BL/6J
transcript	ENSMUST00000104927	Ensembl | MGI Sequence Detail	357	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;