Gm2123 Pseudogene Detail

Summary

• Symbol
  Gm2123
• Name
  predicted gene 2123

• Feature Type
  pseudogene
• IDs
  MGI:3780293
  NCBI Gene: 100039262
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:4218645-4220979 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 2.33 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  180 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3780293	pseudogene	Chr13:4218144-4220979 (-)
129S1/SvImJ	ENSMUSG00200007103	pseudogene	Chr13:1389782-1392617 (-)
A/J	ENSMUSG00195013307	pseudogene	Chr13:797980-800815 (-)
AKR/J	ENSMUSG00220013162	pseudogene	Chr13:1088530-1091365 (-)
BALB/cJ	ENSMUSG00180009585	pseudogene	Chr13:1210144-1212979 (-)
C3H/HeJ	ENSMUSG00175008724	pseudogene	Chr13:1240139-1242974 (-)
C57BL/6NJ	ENSMUSG00215017487	pseudogene	Chr13:1459973-1462808 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005024873	pseudogene	Chr13:1463437-1466143 (-)
CBA/J	ENSMUSG00210022942	pseudogene	Chr13:778828-781663 (-)
DBA/2J	ENSMUSG00185024564	pseudogene	Chr13:1466590-1469425 (-)
FVB/NJ	ENSMUSG00205028021	pseudogene	Chr13:1211830-1214666 (-)
JF1/MsJ	ENSUMUG00000012938	pseudogene	Chr13:1464277-1466980 (-)
LP/J	ENSMUSG00230007581	pseudogene	Chr13:10937169-10939872 (-)
NOD/ShiLtJ	ENSMUSG00190013114	pseudogene	Chr13:925750-928585 (-)
NZO/HlLtJ	ENSMUSG00225034696	pseudogene	Chr13:4824305-4827008 (-)
PWK/PhJ	ENSLUMG00010017250	pseudogene	Chr13:844298-847001 (-)
SPRET/EiJ	ENSMSPG00010026669	pseudogene	Chr13:879342-882175 (-)
WSB/EiJ	ENSIUOG00005023159	pseudogene	Chr13:820753-823588 (-)

Homology

• Gene Tree
  Gm2123
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000112986 (Evidence)
• NCBI Gene
  100039262

Representative Sequences			Length	Strain/Species
genomic	100039262	NCBI Gene Model | MGI Sequence Detail	2335	C57BL/6J

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;