Gm2109 Gene Detail

Summary

• Symbol
  Gm2109
• Name
  predicted gene 2109

• Feature Type
  lncRNA gene
• IDs
  MGI:3780277
  NCBI Gene: 100039222
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr9:83573528-83575276 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  186 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3780277	lncRNA gene	Chr9:83573528-83575300 (+)
129S1/SvImJ	ENSMUSG00200019401	lncRNA gene	Chr9:80665475-80667216 (+)
A/J	ENSMUSG00195011672	lncRNA gene	Chr9:80483190-80484931 (+)
AKR/J	ENSMUSG00220015100	lncRNA gene	Chr9:80579320-80581020 (+)
BALB/cJ	ENSMUSG00180019480	lncRNA gene	Chr9:80588077-80589818 (+)
C3H/HeJ	ENSMUSG00175011768	lncRNA gene	Chr9:80648209-80649950 (+)
C57BL/6NJ	ENSMUSG00215016644	lncRNA gene	Chr9:80578557-80580305 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006801	lincRNA gene	Chr9:80364036-80365759 (+)
CAST/EiJ	ENSTCUG00005009417	lncRNA gene	Chr9:80179747-80181471 (+)
CBA/J	ENSMUSG00210013460	lncRNA gene	Chr9:80685946-80687646 (+)
DBA/2J	ENSMUSG00185007834	lncRNA gene	Chr9:80695489-80697189 (+)
FVB/NJ	ENSMUSG00205028685	lncRNA gene	Chr9:80886074-80887815 (+)
JF1/MsJ	ENSUMUG00000041097	lncRNA gene	Chr9:80587028-80588728 (+)
LP/J	ENSMUSG00230025176	lncRNA gene	Chr9:80803768-80805509 (+)
NOD/ShiLtJ	ENSMUSG00190037167	lncRNA gene	Chr9:80777056-80778797 (+)
NZO/HlLtJ	ENSMUSG00225026001	lncRNA gene	Chr9:81003814-81005555 (+)
PWK/PhJ	ENSLUMG00010016711	lncRNA gene	Chr9:80511032-80512732 (+)
SPRET/EiJ	ENSMSPG00010002779	lncRNA gene	Chr9:81858912-81860640 (+)
WSB/EiJ	ENSIUOG00005027565	lncRNA gene	Chr9:80160128-80161868 (+)

Homology

• Gene Tree
  Gm2109
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm2109
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1

• Ensembl
  ENSMUSG00000100155 (Evidence)
• NCBI Gene
  100039222

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000100155	Ensembl Gene Model | MGI Sequence Detail	1749	C57BL/6J
transcript	ENSMUST00000189326	Ensembl | MGI Sequence Detail	1409	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 9

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;