Gm2077 Pseudogene Detail

Summary

• Symbol
  Gm2077
• Name
  predicted gene 2077

• Feature Type
  pseudogene
• IDs
  MGI:3780244
  NCBI Gene: 100039167
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:4004204-4004522 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 1.96 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  164 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3780244	pseudogene	Chr3:4004203-4004588 (+)
129S1/SvImJ	ENSMUSG00200000950	pseudogene	Chr3:690583-690901 (+)
A/J	ENSMUSG00195001244	pseudogene	Chr3:1024623-1024941 (+)
AKR/J	ENSMUSG00220017059	pseudogene	Chr3:1008837-1009155 (+)
BALB/cJ	ENSMUSG00180007297	pseudogene	Chr3:1016948-1017266 (+)
C3H/HeJ	ENSMUSG00175005091	pseudogene	Chr3:1020263-1020581 (+)
C57BL/6NJ	ENSMUSG00215005335	pseudogene	Chr3:1003196-1003514 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010718	pseudogene	Chr3:505552-505864 (+)
CAST/EiJ	ENSTCUG00005000244	pseudogene	Chr3:1086964-1087282 (+)
CBA/J	ENSMUSG00210000861	pseudogene	Chr3:1014911-1015229 (+)
DBA/2J	ENSMUSG00185000517	pseudogene	Chr3:1008304-1008622 (+)
FVB/NJ	ENSMUSG00205006039	pseudogene	Chr3:856245-856563 (+)
JF1/MsJ	ENSUMUG00000010616	pseudogene	Chr3:1025304-1025622 (+)
LP/J	ENSMUSG00230000138	pseudogene	Chr3:2930685-2931003 (+)
NOD/ShiLtJ	ENSMUSG00190023969	pseudogene	Chr3:1008289-1008607 (+)
NZO/HlLtJ	ENSMUSG00225001589	pseudogene	Chr3:5469657-5469975 (+)
PWK/PhJ	ENSLUMG00010008316	pseudogene	Chr3:1032839-1033157 (+)
SPRET/EiJ	ENSMSPG00010000149	pseudogene	Chr3:902138-902456 (+)
WSB/EiJ	ENSIUOG00005000792	pseudogene	Chr3:1003351-1003669 (+)

Homology

• Gene Tree
  Gm2077
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Gene trapped
  1
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22

• Ensembl
  ENSMUSG00000103224 (Evidence)
• NCBI Gene
  100039167

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000103224	Ensembl Gene Model | MGI Sequence Detail	319	C57BL/6J
transcript	ENSMUST00000195017	Ensembl | MGI Sequence Detail	319	Not Applicable

References

• Summaries
  All 7

  Phenotypes 2
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14