Gm2059 Pseudogene Detail

Summary

• Symbol
  Gm2059
• Name
  predicted gene 2059

• Feature Type
  pseudogene
• IDs
  MGI:3780226
  NCBI Gene: 100039134
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr8:75805769-75806499 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, 35.58 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  138 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3780226	pseudogene	Chr8:75805654-75806780 (+)
129S1/SvImJ	ENSMUSG00200032901	pseudogene	Chr8:70144117-70144847 (+)
A/J	ENSMUSG00195019240	pseudogene	Chr8:70518603-70519333 (+)
AKR/J	ENSMUSG00220023984	pseudogene	Chr8:70641393-70642123 (+)
BALB/cJ	ENSMUSG00180022217	pseudogene	Chr8:70351863-70352593 (+)
C3H/HeJ	ENSMUSG00175011071	pseudogene	Chr8:70446184-70446914 (+)
C57BL/6NJ	ENSMUSG00215037366	pseudogene	Chr8:70079365-70080095 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005039958	pseudogene	Chr8:70055867-70056597 (+)
CBA/J	ENSMUSG00210020304	pseudogene	Chr8:70368163-70368893 (+)
DBA/2J	ENSMUSG00185013187	pseudogene	Chr8:76532559-76533289 (+)
FVB/NJ	ENSMUSG00205042931	pseudogene	Chr8:69548273-69549003 (+)
JF1/MsJ	ENSUMUG00000041283	pseudogene	Chr8:78850880-78851610 (+)
LP/J	ENSMUSG00230034870	pseudogene	Chr8:80201743-80202473 (+)
NOD/ShiLtJ	ENSMUSG00190028764	pseudogene	Chr8:70424289-70425019 (+)
NZO/HlLtJ	ENSMUSG00225023497	pseudogene	Chr8:83536171-83536901 (+)
PWK/PhJ	ENSLUMG00010035702	pseudogene	Chr8:70263239-70263969 (+)
SPRET/EiJ	ENSMSPG00010026241	pseudogene	Chr8:72081484-72082418 (+)
WSB/EiJ	ENSIUOG00005016652	pseudogene	Chr8:71168099-71168829 (+)

Homology

• Gene Tree
  Gm2059
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm2059
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000110429 (Evidence)
• NCBI Gene
  100039134

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000110429	Ensembl Gene Model | MGI Sequence Detail	731	C57BL/6J
transcript	ENSMUST00000212025	Ensembl | MGI Sequence Detail	287	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

  
  

  Microarray probesets 1

References

• Summaries
  All 9

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:157972 Mouse Genome Informatics Scientific Curators, Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2). Database Download. 2010;