Gm1995 Pseudogene Detail

Summary

• Symbol
  Gm1995
• Name
  predicted gene 1995

• Feature Type
  pseudogene
• IDs
  MGI:3780165
  NCBI Gene: 100038982
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:87828136-87830737 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 42.01 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  45 from dbSNP Build 142
• Strain Annotations
  24

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3780165	pseudogene	Chr12:87828120-87832460 (+)
129S1/SvImJ	ENSMUSG00200051813	pseudogene	Chr12:79854417-79857516 (-)
A/J	ENSMUSG00195036559	pseudogene	Chr12:82513818-82516917 (-)
A/J	ENSMUSG00195036383	pseudogene	Chr12:82350794-82353395 (-)
AKR/J	ENSMUSG00220050531	pseudogene	Chr12:80193227-80195828 (+)
BALB/cJ	ENSMUSG00180016431	pseudogene	Chr12:81399624-81402225 (+)
BALB/cJ	ENSMUSG00180016880	pseudogene	Chr12:81383721-81386322 (+)
C3H/HeJ	ENSMUSG00175040895	pseudogene	Chr12:84470226-84472827 (+)
C57BL/6NJ	ENSMUSG00215047487	pseudogene	Chr12:80584595-80586688 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005033512	pseudogene	Chr12:80581262-80583866 (+)
CBA/J	ENSMUSG00210048132	pseudogene	Chr12:80888678-80891279 (+)
CBA/J	ENSMUSG00210048445	pseudogene	Chr12:81093158-81095759 (-)
CBA/J	ENSMUSG00210048475	pseudogene	Chr12:81257320-81260419 (-)
DBA/2J	ENSMUSG00185003147	pseudogene	Chr12:83109195-83112294 (-)
DBA/2J	ENSMUSG00185002984	pseudogene	Chr12:82740598-82743199 (+)
FVB/NJ	ENSMUSG00205044625	pseudogene	Chr12:80559584-80562185 (+)
JF1/MsJ	ENSUMUG00000050826	pseudogene	Chr12:87171170-87173775 (+)
JF1/MsJ	ENSUMUG00000051070	pseudogene	Chr12:86758896-86761995 (+)
JF1/MsJ	ENSUMUG00000051033	pseudogene	Chr12:87691668-87694767 (-)
LP/J	ENSMUSG00230047823	pseudogene	Chr12:90007123-90009724 (-)
LP/J	ENSMUSG00230047768	pseudogene	Chr12:90171269-90174368 (-)
LP/J	ENSMUSG00230047716	pseudogene	Chr12:89802673-89805274 (+)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010030919	pseudogene	Chr12:80781599-80784200 (+)
PWK/PhJ	ENSLUMG00010003801	pseudogene	Chr12:81266282-81268886 (-)
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm1995
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm1995
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  29
• RefSeq
  1

• Ensembl
  ENSMUSG00000113011 (Evidence)
• NCBI Gene
  100038982

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000113011	Ensembl Gene Model | MGI Sequence Detail	2602	C57BL/6J
transcript	ENSMUST00000220838	Ensembl | MGI Sequence Detail	2602	Not Applicable

Molecular
Reagents

• 
  

  Microarray probesets 1

References

• Summaries
  All 8

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:144087 Mouse Genome Informatics Scientific Curators, Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform. Database Download. 2009;