Gm9742 Pseudogene Detail

Summary

• Symbol
  Gm9742
• Name
  predicted gene 9742

• Feature Type
  pseudogene
• IDs
  MGI:3780137
  NCBI Gene: 791083
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:8079590-8081389 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 3.45 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  202 from dbSNP Build 142
• Strain Annotations
  13

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3780137	pseudogene	Chr13:8079539-8081389 (-)
129S1/SvImJ	ENSMUSG00200006768	pseudogene	Chr13:5231590-5256116 (-)
A/J	ENSMUSG00195012960	pseudogene	Chr13:4649442-4673968 (-)
AKR/J	no annotation
BALB/cJ	ENSMUSG00180010070	pseudogene	Chr13:5055171-5079697 (-)
C3H/HeJ	ENSMUSG00175008636	pseudogene	Chr13:5096794-5121312 (-)
C57BL/6NJ	ENSMUSG00215020379	pseudogene	Chr13:5335733-5360259 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005025914	pseudogene	Chr13:5266326-5285026 (-)
CBA/J	ENSMUSG00210023019	pseudogene	Chr13:4625896-4650414 (-)
DBA/2J	ENSMUSG00185025095	pseudogene	Chr13:5314423-5338945 (-)
FVB/NJ	ENSMUSG00205025475	pseudogene	Chr13:5079194-5103712 (-)
JF1/MsJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010017531	pseudogene	Chr13:4717620-4737599 (-)
SPRET/EiJ	ENSMSPG00010027374	pseudogene	Chr13:4680267-4704335 (-)
WSB/EiJ	ENSIUOG00005022847	pseudogene	Chr13:4614605-4639131 (-)

Homology

• Gene Tree
  Gm9742
  

Mutations,
Alleles, and
Phenotypes

• Incidental Mutations
  Mutagenetix , APF
• Find Mice (IMSR)
  7 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  17
• RefSeq
  1

• Ensembl
  ENSMUSG00000113508 (Evidence)
• NCBI Gene
  791083

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000113508	Ensembl Gene Model | MGI Sequence Detail	1800	C57BL/6J
transcript	ENSMUST00000222219	Ensembl | MGI Sequence Detail	1396	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;