Ccnq-ps1 Pseudogene Detail

Summary

• Symbol
  Ccnq-ps1
• Name
  cyclin Q, pseudogene 1
• Synonyms
  Gm9730

• Feature Type
  pseudogene
• IDs
  MGI:3780134
  NCBI Gene: 732481
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  ChrX:72621734-72627606 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 37.35 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  142 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3780134	pseudogene	ChrX:72621734-72627729 (-)
129S1/SvImJ	ENSMUSG00200042983	pseudogene	ChrX:54682180-54688056 (-)
A/J	ENSMUSG00195037283	pseudogene	ChrX:58358410-58364311 (-)
AKR/J	ENSMUSG00220048085	pseudogene	ChrX:53660722-53666621 (-)
BALB/cJ	ENSMUSG00180050020	pseudogene	ChrX:54939140-54945035 (-)
C3H/HeJ	ENSMUSG00175038115	pseudogene	ChrX:58522819-58528715 (-)
C57BL/6NJ	ENSMUSG00215043058	pseudogene	ChrX:55022993-55028881 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005043005	pseudogene	ChrX:56440072-56445941 (-)
CBA/J	ENSMUSG00210046286	pseudogene	ChrX:55203484-55209380 (-)
DBA/2J	ENSMUSG00185037017	pseudogene	ChrX:67625130-67631026 (-)
FVB/NJ	ENSMUSG00205043084	pseudogene	ChrX:54504453-54510352 (-)
JF1/MsJ	ENSUMUG00000045495	pseudogene	ChrX:88364697-88370518 (-)
LP/J	ENSMUSG00230036763	pseudogene	ChrX:74204344-74210220 (-)
NOD/ShiLtJ	ENSMUSG00190047027	pseudogene	ChrX:54443500-54449396 (-)
NZO/HlLtJ	ENSMUSG00225048827	pseudogene	ChrX:79408707-79414585 (-)
PWK/PhJ	ENSLUMG00010047082	pseudogene	ChrX:54185952-54191804 (-)
SPRET/EiJ	ENSMSPG00010037135	pseudogene	ChrX:57268825-57274731 (-)
WSB/EiJ	ENSIUOG00005050163	pseudogene	ChrX:55268514-55274412 (-)

Homology

• Gene Tree
  Ccnq-ps1
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000118463 (Evidence)
• NCBI Gene
  732481

Representative Sequences			Length	Strain/Species
genomic	732481	NCBI Gene Model | MGI Sequence Detail	5873	C57BL/6J

Other
Accession IDs

MGI:6887841

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;