Cyp2d38-ps Pseudogene Detail

Summary

• Symbol
  Cyp2d38-ps
• Name
  cytochrome P450, family 2, subfamily d, member 38, pseudogene
• Synonyms
  Gm9667

• Feature Type
  pseudogene
• IDs
  MGI:3780075
  NCBI Gene: 676200
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr15:82589777-82591466 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, 38.69 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  171 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3780075	pseudogene	Chr15:82589776-82591471 (-)
129S1/SvImJ	ENSMUSG00200053967	pseudogene	Chr15:79691358-79705322 (-)
A/J	ENSMUSG00195051995	pseudogene	Chr15:79623016-79636980 (-)
AKR/J	ENSMUSG00220053230	pseudogene	Chr15:79666201-79680161 (-)
BALB/cJ	ENSMUSG00180053758	pseudogene	Chr15:79499940-79513904 (-)
C3H/HeJ	ENSMUSG00175053526	pseudogene	Chr15:79810914-79824878 (-)
C57BL/6NJ	ENSMUSG00215053352	pseudogene	Chr15:79595200-79609162 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005048727	pseudogene	Chr15:79086789-79100748 (-)
CBA/J	ENSMUSG00210050213	pseudogene	Chr15:79585999-79599967 (-)
DBA/2J	ENSMUSG00185051976	pseudogene	Chr15:79611715-79625672 (-)
FVB/NJ	ENSMUSG00205052275	pseudogene	Chr15:79355248-79369186 (-)
JF1/MsJ	ENSUMUG00000056793	pseudogene	Chr15:79151805-79165752 (-)
LP/J	ENSMUSG00230045829	pseudogene	Chr15:82931705-82945669 (-)
NOD/ShiLtJ	ENSMUSG00190053921	pseudogene	Chr15:79603097-79617061 (-)
NZO/HlLtJ	ENSMUSG00225050222	pseudogene	Chr15:83270280-83284244 (-)
PWK/PhJ	ENSLUMG00010053025	pseudogene	Chr15:79360879-79374837 (-)
SPRET/EiJ	ENSMSPG00010051428	pseudogene	Chr15:81035641-81049250 (-)
WSB/EiJ	ENSIUOG00005050202	pseudogene	Chr15:79676036-79689982 (-)

Homology

• Gene Tree
  Cyp2d38-ps
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  24 phenotype references
  

• All Mutations and Alleles
  7
• Chemically induced (other)
  1
• Radiation induced
  2
• Targeted
  4
• Genomic Mutations
  7 involving Cyp2d38-ps
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000116354 (Evidence)
• NCBI Gene
  676200

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000116354	Ensembl Gene Model | MGI Sequence Detail	1690	C57BL/6J
transcript	ENSMUST00000229065	Ensembl | MGI Sequence Detail	549	Not Applicable

References

• Summaries
  All 28

  Diseases 1

  Phenotypes 24
• Earliest
  J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
• Latest
  J:387680 Ahn B, et al., Disorganization of Transcriptional Regulation and Alteration of Keratin Family Gene Expression in Hairy Ear Mice. Genes (Basel). 2026 Jan 31;17(2)

TSS for Cyp2d38-ps:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr135563	Chr15:82591557-82591576 (-)	-101 bp