Gm9665 Pseudogene Detail

Summary

• Symbol
  Gm9665
• Name
  predicted gene 9665

• Feature Type
  pseudogene
• IDs
  MGI:3780073
  NCBI Gene: 676157
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:93624148-93624689 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, 60.69 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  86 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3780073	pseudogene	Chr17:93624148-93624689 (-)
129S1/SvImJ	ENSMUSG00200023229	pseudogene	Chr17:89033127-89033668 (-)
A/J	ENSMUSG00195029113	pseudogene	Chr17:90452053-90452594 (-)
AKR/J	ENSMUSG00220016619	pseudogene	Chr17:89406781-89407322 (-)
BALB/cJ	ENSMUSG00180027060	pseudogene	Chr17:90127508-90128049 (-)
C3H/HeJ	ENSMUSG00175006999	pseudogene	Chr17:89333601-89334142 (-)
C57BL/6NJ	ENSMUSG00215022657	pseudogene	Chr17:89077183-89077724 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005011958	pseudogene	Chr17:89935294-89935835 (-)
CBA/J	ENSMUSG00210022411	pseudogene	Chr17:89253234-89253775 (-)
DBA/2J	ENSMUSG00185010681	pseudogene	Chr17:91972968-91973509 (-)
FVB/NJ	ENSMUSG00205006110	pseudogene	Chr17:89824566-89825107 (-)
JF1/MsJ	ENSUMUG00000005587	pseudogene	Chr17:91826540-91827081 (-)
LP/J	ENSMUSG00230010987	pseudogene	Chr17:93015534-93016075 (-)
NOD/ShiLtJ	ENSMUSG00190010132	pseudogene	Chr17:89136352-89136893 (-)
NZO/HlLtJ	ENSMUSG00225029440	pseudogene	Chr17:95312629-95313170 (-)
PWK/PhJ	ENSLUMG00010033541	pseudogene	Chr17:89007032-89007573 (-)
SPRET/EiJ	ENSMSPG00010020411	pseudogene	Chr17:89684554-89685095 (-)
WSB/EiJ	ENSIUOG00005021881	pseudogene	Chr17:90030317-90030858 (-)

Homology

• Gene Tree
  Gm9665
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000117362 (Evidence)
• NCBI Gene
  676157

Representative Sequences			Length	Strain/Species
genomic	676157	NCBI Gene Model | MGI Sequence Detail	542	C57BL/6J

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;