Gm9621 Pseudogene Detail

Summary

• Symbol
  Gm9621
• Name
  predicted gene 9621

• Feature Type
  pseudogene
• IDs
  MGI:3780029
  NCBI Gene: 674371
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr9:93273421-93274423 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 48.57 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  45 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3780029	pseudogene	Chr9:93273229-93274443 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0014217	pseudogene	Chr9:94464528-94465530 (-)
A/J	MGP_AJ_G0014233	pseudogene	Chr9:91196658-91197660 (-)
AKR/J	MGP_AKRJ_G0014159	pseudogene	Chr9:93329953-93330955 (-)
BALB/cJ	MGP_BALBcJ_G0014183	pseudogene	Chr9:90846813-90847815 (-)
C3H/HeJ	MGP_C3HHeJ_G0014015	pseudogene	Chr9:93782708-93783710 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0014634	pseudogene	Chr9:97118924-97119926 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012448	pseudogene	Chr9:89152641-89153643 (-)
CAST/EiJ	MGP_CASTEiJ_G0013669	pseudogene	Chr9:93530697-93531699 (-)
CBA/J	no annotation
DBA/2J	MGP_DBA2J_G0014081	pseudogene	Chr9:90694134-90695136 (-)
FVB/NJ	MGP_FVBNJ_G0014078	pseudogene	Chr9:89623160-89624162 (-)
LP/J	MGP_LPJ_G0014167	pseudogene	Chr9:94678676-94679678 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014113	pseudogene	Chr9:102480147-102481149 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014604	pseudogene	Chr9:93566841-93567842 (-)
PWK/PhJ	MGP_PWKPhJ_G0013483	pseudogene	Chr9:90847346-90848347 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0013272	pseudogene	Chr9:93597603-93598598 (-)
WSB/EiJ	MGP_WSBEiJ_G0013729	pseudogene	Chr9:93462650-93463652 (-)

Homology

• Gene Tree
  Gm9621
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm9621
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000098171 (Evidence)
• NCBI Gene
  674371

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000098171	Ensembl Gene Model | MGI Sequence Detail	1003	C57BL/6J
transcript	ENSMUST00000183322	Ensembl | MGI Sequence Detail	1003	Not Applicable

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;