Gm9586 Pseudogene Detail

Summary

• Symbol
  Gm9586
• Name
  predicted gene 9586

• Feature Type
  pseudogene
• IDs
  MGI:3779995
  NCBI Gene: 672972
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:49471739-49472786 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, 24.83 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  175 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3779995	pseudogene	Chr17:49471738-49472786 (-)
129S1/SvImJ	ENSMUSG00200029129	pseudogene	Chr17:44684288-44685361 (-)
A/J	ENSMUSG00195022522	pseudogene	Chr17:46170081-46171128 (-)
AKR/J	ENSMUSG00220038380	pseudogene	Chr17:45170079-45171126 (-)
BALB/cJ	ENSMUSG00180025469	pseudogene	Chr17:45926351-45927398 (-)
C3H/HeJ	ENSMUSG00175016260	pseudogene	Chr17:45233871-45234918 (-)
C57BL/6NJ	ENSMUSG00215037245	pseudogene	Chr17:44796566-44797613 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005025343	pseudogene	Chr17:45970818-45971865 (-)
CBA/J	ENSMUSG00210037881	pseudogene	Chr17:44983430-44984477 (-)
DBA/2J	ENSMUSG00185029831	pseudogene	Chr17:47882490-47883537 (-)
FVB/NJ	ENSMUSG00205052862	pseudogene	Chr17:45449358-45450432 (-)
JF1/MsJ	ENSUMUG00000038037	pseudogene	Chr17:47569190-47570256 (-)
LP/J	ENSMUSG00230042066	pseudogene	Chr17:48795845-48796918 (-)
NOD/ShiLtJ	ENSMUSG00190018557	pseudogene	Chr17:44953497-44954570 (-)
NZO/HlLtJ	ENSMUSG00225043694	pseudogene	Chr17:51035034-51036081 (-)
PWK/PhJ	ENSLUMG00010036301	pseudogene	Chr17:44805118-44806183 (-)
SPRET/EiJ	ENSMSPG00010038121	pseudogene	Chr17:45004586-45005660 (-)
WSB/EiJ	ENSIUOG00005027807	pseudogene	Chr17:45838261-45839308 (-)

Homology

• Gene Tree
  Gm9586
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000117115 (Evidence)
• NCBI Gene
  672972

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000117115	Ensembl Gene Model | MGI Sequence Detail	1048	C57BL/6J
transcript	ENSMUST00000233339	Ensembl | MGI Sequence Detail	1048	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;