Gm9570 Pseudogene Detail

Summary

• Symbol
  Gm9570
• Name
  predicted gene 9570

• Feature Type
  pseudogene
• IDs
  MGI:3779980
  NCBI Gene: 672614
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr14:67204631-67207316 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, 34.60 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  214 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3779980	pseudogene	Chr14:67204429-67207514 (+)
129S1/SvImJ	ENSMUSG00200031597	pseudogene	Chr14:55820317-55823004 (+)
A/J	ENSMUSG00195015758	pseudogene	Chr14:55985832-55988519 (+)
AKR/J	ENSMUSG00220032006	pseudogene	Chr14:55326521-55329208 (+)
BALB/cJ	ENSMUSG00180036379	pseudogene	Chr14:55602032-55604719 (+)
C3H/HeJ	ENSMUSG00175040674	pseudogene	Chr14:57356787-57359474 (+)
C57BL/6NJ	ENSMUSG00215026465	pseudogene	Chr14:55539491-55542176 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005039577	pseudogene	Chr14:57242468-57245176 (+)
CBA/J	ENSMUSG00210041139	pseudogene	Chr14:55974608-55977295 (+)
DBA/2J	ENSMUSG00185024105	pseudogene	Chr14:61154621-61157308 (+)
FVB/NJ	ENSMUSG00205040558	pseudogene	Chr14:55488663-55491350 (+)
JF1/MsJ	ENSUMUG00000044334	pseudogene	Chr14:72313094-72315454 (+)
LP/J	ENSMUSG00230036837	pseudogene	Chr14:73183830-73186517 (+)
NOD/ShiLtJ	ENSMUSG00190044241	pseudogene	Chr14:55767815-55770502 (+)
NZO/HlLtJ	ENSMUSG00225040344	pseudogene	Chr14:63500694-63503381 (+)
PWK/PhJ	ENSLUMG00010038325	pseudogene	Chr14:55192076-55194423 (+)
SPRET/EiJ	ENSMSPG00010035922	pseudogene	Chr14:58704648-58707008 (+)
WSB/EiJ	ENSIUOG00005041771	pseudogene	Chr14:55211743-55214430 (+)

Homology

• Gene Tree
  Gm9570
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm9570
• Find Mice (IMSR)
  1 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000114558 (Evidence)
• NCBI Gene
  672614

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000114558	Ensembl Gene Model | MGI Sequence Detail	2686	C57BL/6J
transcript	ENSMUST00000224795	Ensembl | MGI Sequence Detail	2372	Not Applicable

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm9570:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr126321	Chr14:67204239-67204248 (+)	-387 bp