Gm9547 Pseudogene Detail

Summary

• Symbol
  Gm9547
• Name
  predicted gene 9547

• Feature Type
  pseudogene
• IDs
  MGI:3779957
  NCBI Gene: 672095
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:56399588-56400258 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, 28.19 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  115 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3779957	pseudogene	Chr14:56398722-56400262 (-)
129S1/SvImJ	ENSMUSG00200043580	pseudogene	Chr14:44987366-44988036 (-)
A/J	ENSMUSG00195035131	pseudogene	Chr14:45204124-45204794 (-)
AKR/J	ENSMUSG00220033104	pseudogene	Chr14:44531986-44532656 (-)
BALB/cJ	ENSMUSG00180052687	pseudogene	Chr14:44827809-44828479 (-)
C3H/HeJ	ENSMUSG00175052471	pseudogene	Chr14:46510120-46510790 (-)
C57BL/6NJ	ENSMUSG00215049108	pseudogene	Chr14:44722871-44723541 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005049582	pseudogene	Chr14:46503625-46504295 (-)
CBA/J	ENSMUSG00210048986	pseudogene	Chr14:45190676-45191346 (-)
DBA/2J	ENSMUSG00185055721	pseudogene	Chr14:50311525-50312195 (-)
FVB/NJ	ENSMUSG00205047224	pseudogene	Chr14:44593499-44594169 (-)
JF1/MsJ	ENSUMUG00000048230	pseudogene	Chr14:61489373-61490043 (-)
LP/J	ENSMUSG00230053379	pseudogene	Chr14:62353206-62353876 (-)
NOD/ShiLtJ	ENSMUSG00190049394	pseudogene	Chr14:44956839-44957509 (-)
NZO/HlLtJ	ENSMUSG00225046892	pseudogene	Chr14:52643570-52644240 (-)
PWK/PhJ	ENSLUMG00010052036	pseudogene	Chr14:44413298-44413968 (-)
SPRET/EiJ	ENSMSPG00010048864	pseudogene	Chr14:47923630-47924297 (-)
WSB/EiJ	ENSIUOG00005043921	pseudogene	Chr14:44388535-44389205 (-)

Homology

• Gene Tree
  Gm9547
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm9547
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000114908 (Evidence)
• NCBI Gene
  672095

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000114908	Ensembl Gene Model | MGI Sequence Detail	671	C57BL/6J
transcript	ENSMUST00000224928	Ensembl | MGI Sequence Detail	671	Not Applicable

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;