Gm9520 Pseudogene Detail

Summary

• Symbol
  Gm9520
• Name
  predicted gene 9520

• Feature Type
  pseudogene
• IDs
  MGI:3779929
  NCBI Gene: 671182
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr8:82887238-82887790 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, 39.33 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  99 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3779929	pseudogene	Chr8:82887238-82892268 (+)
129S1/SvImJ	ENSMUSG00200026157	pseudogene	Chr8:77276213-77281259 (+)
A/J	ENSMUSG00195018713	pseudogene	Chr8:77623583-77628601 (+)
AKR/J	ENSMUSG00220024375	pseudogene	Chr8:77672964-77678010 (+)
BALB/cJ	ENSMUSG00180022189	pseudogene	Chr8:77474760-77479808 (+)
C3H/HeJ	ENSMUSG00175011689	pseudogene	Chr8:77554889-77559906 (+)
C57BL/6NJ	ENSMUSG00215023060	pseudogene	Chr8:77180623-77185639 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005036931	pseudogene	Chr8:77073439-77078453 (+)
CBA/J	ENSMUSG00210020781	pseudogene	Chr8:77547005-77552015 (+)
DBA/2J	ENSMUSG00185038145	pseudogene	Chr8:83656208-83661220 (+)
FVB/NJ	ENSMUSG00205043277	pseudogene	Chr8:76586754-76591752 (+)
JF1/MsJ	ENSUMUG00000038782	pseudogene	Chr8:85942553-85947560 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190030091	pseudogene	Chr8:77611812-77616858 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010030528	pseudogene	Chr8:77311635-77316655 (+)
SPRET/EiJ	ENSMSPG00010024731	pseudogene	Chr8:79165174-79170180 (+)
WSB/EiJ	ENSIUOG00005016590	pseudogene	Chr8:78363867-78368859 (+)

Homology

• Gene Tree
  Gm9520
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm9520
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000109664 (Evidence)
• NCBI Gene
  671182

Representative Sequences			Length	Strain/Species
genomic	671182	NCBI Gene Model | MGI Sequence Detail	553	C57BL/6J

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;