Gm9472 Pseudogene Detail

Summary

• Symbol
  Gm9472
• Name
  predicted gene 9472

• Feature Type
  pseudogene
• IDs
  MGI:3779882
  NCBI Gene: 669866
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:35868738-35869263 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 15.87 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  114 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3779882	pseudogene	Chr12:35868738-35869351 (-)
129S1/SvImJ	ENSMUSG00200016104	pseudogene	Chr12:27737208-27737733 (-)
A/J	ENSMUSG00195018724	pseudogene	Chr12:30410970-30411495 (-)
AKR/J	ENSMUSG00220033677	pseudogene	Chr12:28385813-28386338 (-)
BALB/cJ	ENSMUSG00180027288	pseudogene	Chr12:29415160-29415685 (-)
C3H/HeJ	ENSMUSG00175017768	pseudogene	Chr12:32442715-32443240 (-)
C57BL/6NJ	ENSMUSG00215023081	pseudogene	Chr12:28798155-28798680 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005010463	pseudogene	Chr12:29213430-29214005 (-)
CBA/J	ENSMUSG00210008784	pseudogene	Chr12:28947804-28948329 (-)
DBA/2J	ENSMUSG00185020344	pseudogene	Chr12:30967385-30967910 (-)
FVB/NJ	ENSMUSG00205006556	pseudogene	Chr12:29017821-29018346 (-)
JF1/MsJ	ENSUMUG00000011462	pseudogene	Chr12:35105749-35106274 (-)
LP/J	ENSMUSG00230024641	pseudogene	Chr12:37910300-37910825 (-)
NOD/ShiLtJ	ENSMUSG00190019063	pseudogene	Chr12:27905174-27905699 (-)
NZO/HlLtJ	ENSMUSG00225031857	pseudogene	Chr12:40128780-40129305 (-)
PWK/PhJ	ENSLUMG00010011725	pseudogene	Chr12:29334246-29334824 (-)
SPRET/EiJ	ENSMSPG00010006062	pseudogene	Chr12:29982934-29983456 (-)
WSB/EiJ	ENSIUOG00005022072	pseudogene	Chr12:28621575-28622100 (-)

Homology

• Gene Tree
  Gm9472
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000114090 (Evidence)
• NCBI Gene
  669866

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000114090	Ensembl Gene Model | MGI Sequence Detail	526	C57BL/6J
transcript	ENSMUST00000221625	Ensembl | MGI Sequence Detail	526	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;