Gm9428 Pseudogene Detail

Summary

• Symbol
  Gm9428
• Name
  predicted gene 9428

• Feature Type
  pseudogene
• IDs
  MGI:3779850
  NCBI Gene: 668968
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  ChrX:5188789-5189500 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 2.31 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1 from dbSNP Build 142
• Strain Annotations
  36

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3779850	pseudogene	ChrX:5188789-5189500 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	ENSMUSG00185030200	pseudogene	ChrX:867060-868748 (-)
DBA/2J	ENSMUSG00185029141	pseudogene	ChrX:6551897-6553589 (-)
DBA/2J	ENSMUSG00185030534	pseudogene	ChrX:2851573-2853261 (+)
DBA/2J	ENSMUSG00185030657	pseudogene	ChrX:3818489-3820179 (-)
DBA/2J	ENSMUSG00185030825	pseudogene	ChrX:4479419-4481109 (-)
DBA/2J	ENSMUSG00185030794	pseudogene	ChrX:4256168-4257858 (-)
DBA/2J	ENSMUSG00185030260	pseudogene	ChrX:1518449-1520141 (+)
DBA/2J	ENSMUSG00185031119	pseudogene	ChrX:6188881-6190350 (-)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000016949	pseudogene	ChrX:1004828-1006518 (+)
JF1/MsJ	ENSUMUG00000019098	pseudogene	ChrX:12624666-12626356 (+)
JF1/MsJ	ENSUMUG00000016851	pseudogene	ChrX:10141632-10143324 (-)
JF1/MsJ	ENSUMUG00000017042	pseudogene	ChrX:6414482-6416172 (-)
JF1/MsJ	ENSUMUG00000017488	pseudogene	ChrX:9555845-9557535 (-)
JF1/MsJ	ENSUMUG00000016919	pseudogene	ChrX:56306-57996 (+)
LP/J	ENSMUSG00230009965	pseudogene	Chr13:4665378-4667068 (+)
LP/J	ENSMUSG00230010055	pseudogene	Chr13:6528591-6530281 (+)
LP/J	ENSMUSG00230007572	pseudogene	ChrX:7415488-7417178 (+)
LP/J	ENSMUSG00230007556	pseudogene	ChrX:6845139-6846829 (+)
LP/J	ENSMUSG00230010325	pseudogene	Chr13:6993746-6995428 (-)
LP/J	ENSMUSG00230007439	pseudogene	ChrX:3068315-3070007 (+)
LP/J	ENSMUSG00230007492	pseudogene	ChrX:4669710-4671402 (+)
LP/J	ENSMUSG00230007610	pseudogene	ChrX:7850268-7851958 (+)
LP/J	ENSMUSG00230032793	pseudogene	ChrX:11101649-11103341 (-)
LP/J	ENSMUSG00230009897	pseudogene	Chr13:3857892-3859582 (-)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	ENSMUSG00225038209	pseudogene	ChrX:7048529-7050219 (-)
NZO/HlLtJ	ENSMUSG00225046456	pseudogene	ChrX:13610901-13612591 (-)
NZO/HlLtJ	ENSMUSG00225038183	pseudogene	ChrX:5495631-5497323 (+)
NZO/HlLtJ	ENSMUSG00225038660	pseudogene	ChrX:9341487-9343169 (+)
NZO/HlLtJ	ENSMUSG00225038104	pseudogene	ChrX:3457450-3459142 (+)
NZO/HlLtJ	ENSMUSG00225038329	pseudogene	ChrX:9806690-9808380 (-)
NZO/HlLtJ	ENSMUSG00225046383	pseudogene	ChrX:12481191-12482881 (+)
NZO/HlLtJ	ENSMUSG00225046350	pseudogene	ChrX:11672078-11673768 (-)
NZO/HlLtJ	ENSMUSG00225045826	pseudogene	ChrX:16337826-16339518 (-)
NZO/HlLtJ	ENSMUSG00225046480	pseudogene	ChrX:14048564-14050254 (-)
PWK/PhJ	no annotation
SPRET/EiJ	ENSMSPG00010026508	pseudogene	ChrX:3757722-3759405 (+)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm9428
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  39

• Ensembl
  ENSMUSG00000085706 (Evidence)
• NCBI Gene
  668968

Representative Sequences			Length	Strain/Species
genomic	668968	NCBI Gene Model | MGI Sequence Detail	712	C57BL/6J

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;