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Gm8539 Pseudogene Detail
Summary
  • Symbol
    Gm8539
  • Name
    predicted gene 8539
Location &
Maps
more
  • Sequence Map
    Chr5:21818992-21819492 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 9.97 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    119 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3779802
 pseudogene Chr5:21816767-21819557 (-)
129S1/SvImJ ENSMUSG00200011613
 pseudogene Chr5:17450819-17451319 (-)
A/J ENSMUSG00195041224
 pseudogene Chr5:16938635-16939135 (-)
AKR/J ENSMUSG00220040105
 pseudogene Chr5:16973255-16973755 (-)
BALB/cJ ENSMUSG00180025688
 pseudogene Chr5:16785184-16785684 (-)
C3H/HeJ ENSMUSG00175027443
 pseudogene Chr5:18746854-18747354 (-)
C57BL/6NJ ENSMUSG00215023588
 pseudogene Chr5:17352697-17353197 (-)
CAROLI/EiJ no annotation
CAST/EiJ ENSTCUG00005003461
 pseudogene Chr5:17014176-17014676 (-)
CAST/EiJ ENSTCUG00005016727
 pseudogene Chr4:12251699-12252199 (-)
CAST/EiJ ENSTCUG00005007570
 pseudogene Chr14:109195207-109195706 (-)
CBA/J ENSMUSG00210005780
 pseudogene Chr5:17781042-17781542 (-)
DBA/2J ENSMUSG00185017574
 pseudogene Chr5:19262945-19263445 (-)
FVB/NJ ENSMUSG00205035329
 pseudogene Chr5:16484075-16484575 (-)
JF1/MsJ ENSUMUG00000006737
 pseudogene Chr5:23858324-23858824 (-)
LP/J ENSMUSG00230026528
 pseudogene Chr5:23733145-23733645 (-)
NOD/ShiLtJ ENSMUSG00190005285
 pseudogene Chr5:16791097-16791597 (-)
NZO/HlLtJ ENSMUSG00225009749
 pseudogene Chr5:29126551-29127051 (-)
PWK/PhJ ENSLUMG00010036191
 pseudogene Chr5:16894312-16894812 (-)
SPRET/EiJ no annotation
WSB/EiJ ENSIUOG00005032122
 pseudogene Chr5:19601252-19601752 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    2
  • Spontaneous
    1
  • Targeted
    1
  • Genomic Mutations
    4 involving Gm8539
  • Find Mice (IMSR)
    0 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000106294 Ensembl Gene Model | MGI Sequence Detail 501 C57BL/6J ±  kb
transcript ENSMUST00000199822 Ensembl | MGI Sequence Detail 501 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 10
    Phenotypes 5
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:269071 Wong JC, et al., Functional evidence implicating chromosome 7q22 haploinsufficiency in myelodysplastic syndrome pathogenesis. Elife. 2015 Jul 20;4
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/01/2026
MGI 6.24 		The Jackson Laboratory