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Platr6 Gene Detail
Summary
  • Symbol
    Platr6
  • Name
    pluripotency associated transcript 6
  • Synonyms
    Gm6846
Location &
Maps
more
  • Sequence Map
    Chr10:21706384-21720997 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 10, 9.83 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    590 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3779636
 lncRNA gene Chr10:21706384-21737908 (-)
129S1/SvImJ ENSMUSG00200011417
 lncRNA gene Chr10:18695673-18710006 (-)
A/J ENSMUSG00195007240
 lncRNA gene Chr10:18707841-18722174 (-)
AKR/J ENSMUSG00220010379
 lncRNA gene Chr10:18612132-18626461 (-)
BALB/cJ ENSMUSG00180015893
 lncRNA gene Chr10:18832060-18846393 (-)
C3H/HeJ ENSMUSG00175020791
 lncRNA gene Chr10:18854674-18869028 (-)
C57BL/6NJ ENSMUSG00215003926
 lncRNA gene Chr10:18661802-18676154 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0004628
 lincRNA gene Chr10:17856785-17873917 (-)
CAST/EiJ ENSTCUG00005030632
 lncRNA gene Chr10:18604831-18619453 (-)
CBA/J ENSMUSG00210015566
 lncRNA gene Chr10:18791749-18806101 (-)
DBA/2J ENSMUSG00185007274
 lncRNA gene Chr10:18776766-18791120 (-)
FVB/NJ ENSMUSG00205020798
 lncRNA gene Chr10:18688975-18703307 (-)
JF1/MsJ ENSUMUG00000014989
 lncRNA gene Chr10:18824288-18838619 (-)
LP/J ENSMUSG00230011714
 lncRNA gene Chr10:20429656-20443985 (-)
NOD/ShiLtJ ENSMUSG00190010818
 lncRNA gene Chr10:18766935-18781264 (-)
NZO/HlLtJ ENSMUSG00225030493
 lncRNA gene Chr10:24916842-24931191 (-)
PWK/PhJ ENSLUMG00010015540
 lncRNA gene Chr10:18605155-18618664 (-)
SPRET/EiJ ENSMSPG00010011147
 lncRNA gene Chr10:19221285-19236002 (-)
WSB/EiJ ENSIUOG00005023464
 lncRNA gene Chr10:18399238-18413593 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    35
  • RefSeq
    4
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000097107 Ensembl Gene Model | MGI Sequence Detail 14614 C57BL/6J ±  kb
transcript ENSMUST00000180731 Ensembl | MGI Sequence Detail 1818 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1
References
more
  • Summaries
    All 12
    Gene Ontology 1
    Phenotypes 5
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:241492 Bergmann JH, et al., Regulation of the ESC transcriptome by nuclear long noncoding RNAs. Genome Res. 2015 Sep;25(9):1336-46
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/01/2026
MGI 6.24 		The Jackson Laboratory