Gm6558 Pseudogene Detail

Summary

• Symbol
  Gm6558
• Name
  predicted gene 6558

• Feature Type
  pseudogene
• IDs
  MGI:3779607
  NCBI Gene: 625125
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:31698964-31741991 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 15.36 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  652 from dbSNP Build 142
• Strain Annotations
  15

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3779607	pseudogene	Chr3:31698945-31741991 (-)
129S1/SvImJ	no annotation
A/J	ENSMUSG00195021536	pseudogene	Chr3:28422894-28468939 (-)
AKR/J	ENSMUSG00220008644	pseudogene	Chr3:28440133-28486500 (-)
BALB/cJ	ENSMUSG00180034786	pseudogene	Chr3:28549428-28595204 (-)
C3H/HeJ	ENSMUSG00175028164	pseudogene	Chr3:28415849-28461872 (-)
C57BL/6NJ	ENSMUSG00215018300	pseudogene	Chr3:28823470-28869255 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005026036	pseudogene	Chr3:28333769-28373397 (-)
CBA/J	ENSMUSG00210036650	pseudogene	Chr3:28501838-28547883 (-)
DBA/2J	no annotation
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000005478	pseudogene	Chr3:25497076-25529992 (+)
LP/J	ENSMUSG00230002429	pseudogene	Chr3:30662232-30708347 (-)
NOD/ShiLtJ	ENSMUSG00190038950	pseudogene	Chr3:28739221-28785006 (-)
NZO/HlLtJ	ENSMUSG00225007562	pseudogene	Chr3:33280204-33326319 (-)
PWK/PhJ	ENSLUMG00010036237	pseudogene	Chr3:28198334-28271305 (-)
SPRET/EiJ	ENSMSPG00010025313	pseudogene	Chr3:28615066-28652130 (-)
WSB/EiJ	ENSIUOG00005036039	pseudogene	Chr3:26038657-26073304 (+)

Homology

• Gene Tree
  Gm6558
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Radiation induced
  1
• Genomic Mutations
  1 involving Gm6558
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18

• Ensembl
  ENSMUSG00000103499 (Evidence)
• NCBI Gene
  625125

Representative Sequences			Length	Strain/Species
genomic	625125	NCBI Gene Model | MGI Sequence Detail	43028	C57BL/6J

References

• Summaries
  All 7

  Diseases 1

  Phenotypes 2
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426