Gm6201 Pseudogene Detail

Summary

• Symbol
  Gm6201
• Name
  predicted gene 6201

• Feature Type
  pseudogene
• IDs
  MGI:3779571
  NCBI Gene: 621103
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:105436762-105438535 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, 55.53 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  233 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3779571	pseudogene	Chr14:105436531-105438861 (-)
129S1/SvImJ	ENSMUSG00200018106	pseudogene	Chr14:94037649-94039422 (-)
A/J	ENSMUSG00195004437	pseudogene	Chr14:94121864-94123637 (-)
AKR/J	ENSMUSG00220001168	pseudogene	Chr14:93549287-93551060 (-)
BALB/cJ	ENSMUSG00180010580	pseudogene	Chr14:93605482-93607255 (-)
C3H/HeJ	ENSMUSG00175013923	pseudogene	Chr14:95496695-95498468 (-)
C57BL/6NJ	ENSMUSG00215006593	pseudogene	Chr14:93691065-93692838 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005002897	pseudogene	Chr14:95080018-95081790 (-)
CBA/J	ENSMUSG00210014341	pseudogene	Chr14:94184164-94185937 (-)
DBA/2J	ENSMUSG00185011214	pseudogene	Chr14:99344913-99346687 (-)
FVB/NJ	ENSMUSG00205008764	pseudogene	Chr14:93303852-93305630 (-)
JF1/MsJ	ENSUMUG00000012886	pseudogene	Chr14:110369707-110371483 (-)
LP/J	ENSMUSG00230003948	pseudogene	Chr14:111239857-111241633 (-)
NOD/ShiLtJ	ENSMUSG00190002210	pseudogene	Chr14:93974545-93976318 (-)
NZO/HlLtJ	ENSMUSG00225025264	pseudogene	Chr14:101623606-101625379 (-)
PWK/PhJ	ENSLUMG00010001150	pseudogene	Chr14:93234662-93236435 (-)
SPRET/EiJ	ENSMSPG00010009731	pseudogene	Chr14:97219127-97220896 (-)
WSB/EiJ	ENSIUOG00005006380	pseudogene	Chr14:93172785-93174560 (-)

Homology

• Gene Tree
  Gm6201
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm6201
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000115247 (Evidence)
• NCBI Gene
  621103

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000115247	Ensembl Gene Model | MGI Sequence Detail	1774	C57BL/6J
transcript	ENSMUST00000226852	Ensembl | MGI Sequence Detail	1774	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

  
  

  Microarray probesets 1

References

• Summaries
  All 9

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:144087 Mouse Genome Informatics Scientific Curators, Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform. Database Download. 2009;