Gm6192 Pseudogene Detail

Summary

• Symbol
  Gm6192
• Name
  predicted gene 6192

• Feature Type
  pseudogene
• IDs
  MGI:3779569
  NCBI Gene: 620946
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr19:7937108-7938472 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, 5.37 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  109 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3779569	pseudogene	Chr19:7936908-7938537 (-)
129S1/SvImJ	ENSMUSG00200052692	pseudogene	Chr19:4662695-4664059 (-)
A/J	ENSMUSG00195054156	pseudogene	Chr19:5064204-5065568 (-)
AKR/J	ENSMUSG00220051006	pseudogene	Chr19:4837452-4838816 (-)
BALB/cJ	ENSMUSG00180051891	pseudogene	Chr19:5428177-5429541 (-)
C3H/HeJ	ENSMUSG00175015332	pseudogene	Chr19:4701989-4703353 (-)
C57BL/6NJ	ENSMUSG00215047809	pseudogene	Chr19:4903139-4904503 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005045208	pseudogene	Chr19:4805744-4807111 (-)
CBA/J	ENSMUSG00210050591	pseudogene	Chr19:4709155-4710519 (-)
DBA/2J	ENSMUSG00185052958	pseudogene	Chr19:5063828-5065192 (-)
FVB/NJ	ENSMUSG00205053631	pseudogene	Chr19:5048964-5050328 (-)
JF1/MsJ	ENSUMUG00000056569	pseudogene	Chr19:5015601-5016968 (-)
LP/J	ENSMUSG00230054178	pseudogene	Chr19:5989378-5990742 (-)
NOD/ShiLtJ	ENSMUSG00190053156	pseudogene	Chr19:4597816-4599180 (-)
NZO/HlLtJ	ENSMUSG00225027042	pseudogene	Chr19:9698203-9699567 (-)
PWK/PhJ	ENSLUMG00010008747	pseudogene	Chr19:4803176-4804463 (-)
SPRET/EiJ	ENSMSPG00010051718	pseudogene	Chr19:5042539-5043906 (-)
SPRET/EiJ	ENSMSPG00010051393	pseudogene	Chr19:4757537-4758904 (-)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm6192
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000118220 (Evidence)
• NCBI Gene
  620946

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000118220	Ensembl Gene Model | MGI Sequence Detail	1365	C57BL/6J
transcript	ENSMUST00000236907	Ensembl | MGI Sequence Detail	1365	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm6192:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr158006	Chr19:7938533-7938535 (-)	-62 bp