Gm6150 Gene Detail

Summary

• Symbol
  Gm6150
• Name
  predicted gene 6150

• Feature Type
  lncRNA gene
  BioType Conflict
  
• IDs
  MGI:3779560
  NCBI Gene: 620417
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:9560466-9567653 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 3.18 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  352 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3779560	lncRNA gene	Chr10:9559652-9567653 (+)
129S1/SvImJ	ENSMUSG00200010547	pseudogene	Chr10:6571975-6579972 (+)
A/J	ENSMUSG00195010078	pseudogene	Chr10:6461817-6469807 (+)
AKR/J	ENSMUSG00220007622	pseudogene	Chr10:6584970-6592958 (+)
BALB/cJ	ENSMUSG00180025581	pseudogene	Chr10:6623770-6631762 (+)
C3H/HeJ	ENSMUSG00175013632	pseudogene	Chr10:6614567-6622555 (+)
C57BL/6NJ	ENSMUSG00215005497	pseudogene	Chr10:6503356-6511354 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005018299	pseudogene	Chr10:6588442-6596410 (+)
CBA/J	ENSMUSG00210012641	pseudogene	Chr10:6560246-6568230 (+)
DBA/2J	ENSMUSG00185010586	pseudogene	Chr10:6605879-6613876 (+)
FVB/NJ	ENSMUSG00205009116	pseudogene	Chr10:6571966-6579970 (+)
JF1/MsJ	ENSUMUG00000039684	pseudogene	Chr10:6665235-6673460 (+)
LP/J	ENSMUSG00230017967	pseudogene	Chr10:8223595-8231583 (+)
NOD/ShiLtJ	ENSMUSG00190025306	pseudogene	Chr10:6569281-6577272 (+)
NZO/HlLtJ	ENSMUSG00225017317	pseudogene	Chr10:12754684-12762681 (+)
PWK/PhJ	ENSLUMG00010020869	pseudogene	Chr10:6392070-6400287 (+)
SPRET/EiJ	ENSMSPG00010006857	pseudogene	Chr10:6752174-6760494 (+)
WSB/EiJ	ENSIUOG00005013921	pseudogene	Chr10:6490287-6498276 (+)

Gene Ontology
(GO)
Classifications

Expression

• cDNA Data
  12

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  1

• Ensembl
  ENSMUSG00000111901 (Evidence), ENSMUSG00000121723 (Evidence)
• NCBI Gene
  620417

Representative Sequences			Length	Strain/Species
genomic	620417	NCBI Gene Model | MGI Sequence Detail	7188	C57BL/6J
transcript	NR_038036	RefSeq | MGI Sequence Detail	2980	C57BL/6

Molecular
Reagents

• All nucleic 12

  cDNA 12

References

• Summaries
  All 7
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:57747 MGI Genome Annotation Group and UniGene Staff, MGI-UniGene Interconnection Effort. Database Download. 2015;