Gm5340 Pseudogene Detail

Summary

• Symbol
  Gm5340
• Name
  predicted gene 5340

• Feature Type
  pseudogene
• IDs
  MGI:3779484
  NCBI Gene: 384710
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:3333163-3334038 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 1.92 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  46 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3779484	pseudogene	Chr7:3333159-3334038 (-)
129S1/SvImJ	ENSMUSG00200041619	pseudogene	Chr7:242381-243260 (-)
A/J	ENSMUSG00195053585	pseudogene	Chr7:161186-162065 (-)
AKR/J	ENSMUSG00220031944	pseudogene	Chr7:3864140-3865019 (+)
BALB/cJ	ENSMUSG00180051574	pseudogene	Chr7:160937-161816 (-)
C3H/HeJ	ENSMUSG00175051397	pseudogene	Chr7:160919-161798 (-)
C57BL/6NJ	ENSMUSG00215044328	pseudogene	Chr7:154707-155586 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012095	pseudogene	Chr7:89291-90222 (-)
CAST/EiJ	ENSTCUG00005028659	pseudogene	Chr7:165000-165879 (-)
CBA/J	ENSMUSG00210047605	pseudogene	Chr7:160849-161728 (-)
DBA/2J	ENSMUSG00185046298	pseudogene	Chr7:346281-347160 (-)
FVB/NJ	ENSMUSG00205046486	pseudogene	Chr7:156689-157568 (-)
JF1/MsJ	ENSUMUG00000053631	pseudogene	Chr7:367152-368031 (-)
LP/J	ENSMUSG00230040014	pseudogene	Chr7:3360349-3361228 (-)
NOD/ShiLtJ	ENSMUSG00190052269	pseudogene	Chr7:161155-162034 (-)
NZO/HlLtJ	ENSMUSG00225021582	pseudogene	Chr7:1167444-1168323 (-)
PWK/PhJ	ENSLUMG00010049291	pseudogene	Chr7:3870607-3871482 (-)
SPRET/EiJ	ENSMSPG00010048510	pseudogene	Chr7:368261-369140 (-)
WSB/EiJ	ENSIUOG00005053090	pseudogene	Chr7:154301-155180 (-)

Homology

• Gene Tree
  Gm5340
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000108105 (Evidence)
• NCBI Gene
  384710

Representative Sequences			Length	Strain/Species
genomic	384710	NCBI Gene Model | MGI Sequence Detail	876	C57BL/6J

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;