Gm4927 Pseudogene Detail

Summary

• Symbol
  Gm4927
• Name
  predicted gene 4927

• Feature Type
  pseudogene
• IDs
  MGI:3779449
  NCBI Gene: 238049
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:6331019-6332336 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 2.80 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  208 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3779449	pseudogene	Chr12:6330751-6332420 (-)
129S1/SvImJ	ENSMUSG00200024458	pseudogene	Chr12:3297844-3299161 (-)
A/J	ENSMUSG00195016709	pseudogene	Chr12:3340042-3341359 (-)
AKR/J	ENSMUSG00220032043	pseudogene	Chr12:3325425-3326742 (-)
BALB/cJ	ENSMUSG00180015194	pseudogene	Chr12:3336504-3337821 (-)
C3H/HeJ	ENSMUSG00175009905	pseudogene	Chr12:3296214-3297525 (-)
C57BL/6NJ	ENSMUSG00215027352	pseudogene	Chr12:3258301-3259618 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005023895	pseudogene	Chr12:3135247-3136564 (-)
CBA/J	ENSMUSG00210013656	pseudogene	Chr12:3315862-3317173 (-)
DBA/2J	ENSMUSG00185021395	pseudogene	Chr12:3304476-3305793 (-)
FVB/NJ	ENSMUSG00205003318	pseudogene	Chr12:3085128-3086445 (-)
JF1/MsJ	ENSUMUG00000040769	pseudogene	Chr12:3316580-3317893 (-)
LP/J	ENSMUSG00230012435	pseudogene	Chr12:5134530-5135847 (-)
NOD/ShiLtJ	ENSMUSG00190008535	pseudogene	Chr12:4548768-4550085 (-)
NZO/HlLtJ	ENSMUSG00225019503	pseudogene	Chr12:7194653-7195970 (-)
PWK/PhJ	ENSLUMG00010017328	pseudogene	Chr12:3138906-3140219 (-)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005002414	pseudogene	Chr12:3319185-3320502 (-)

Homology

• Gene Tree
  Gm4927
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000112591 (Evidence)
• NCBI Gene
  238049

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000112591	Ensembl Gene Model | MGI Sequence Detail	1318	C57BL/6J
transcript	ENSMUST00000219548	Ensembl | MGI Sequence Detail	1318	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;