Gm11110 Gene Detail

Summary

• Symbol
  Gm11110
• Name
  predicted gene 11110

• Feature Type
  lncRNA gene
• IDs
  MGI:3779362
  NCBI Gene: 100169874
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr17:57399023-57412942 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, 29.66 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  398 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3779362	lncRNA gene	Chr17:57398336-57412976 (-)
129S1/SvImJ	ENSMUSG00200016972	lncRNA gene	Chr17:52674111-52688750 (-)
A/J	ENSMUSG00195007107	lncRNA gene	Chr17:54062393-54076997 (-)
AKR/J	ENSMUSG00220013802	lncRNA gene	Chr17:53111747-53126356 (-)
BALB/cJ	ENSMUSG00180006213	lncRNA gene	Chr17:53820059-53834657 (-)
C3H/HeJ	ENSMUSG00175007455	lncRNA gene	Chr17:53136026-53150629 (-)
C57BL/6NJ	ENSMUSG00215009302	lncRNA gene	Chr17:52749563-52764190 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0021806	protein coding gene	Chr17:53694263-53706957 (-)
CAST/EiJ	ENSTCUG00005019415	lncRNA gene	Chr17:53867068-53881678 (-)
CBA/J	ENSMUSG00210029296	lncRNA gene	Chr17:52903082-52917682 (-)
DBA/2J	ENSMUSG00185009303	lncRNA gene	Chr17:55772924-55787524 (-)
FVB/NJ	ENSMUSG00205007296	lncRNA gene	Chr17:53450446-53465053 (-)
JF1/MsJ	ENSUMUG00000035145	lncRNA gene	Chr17:55458829-55473328 (-)
LP/J	ENSMUSG00230029443	lncRNA gene	Chr17:56751453-56766091 (-)
NOD/ShiLtJ	ENSMUSG00190011581	lncRNA gene	Chr17:52905011-52919634 (-)
NZO/HlLtJ	ENSMUSG00225043523	lncRNA gene	Chr17:59035459-59050097 (-)
PWK/PhJ	ENSLUMG00010009416	lncRNA gene	Chr17:52711473-52725896 (-)
SPRET/EiJ	ENSMSPG00010005825	lncRNA gene	Chr17:53031855-53047133 (-)
WSB/EiJ	ENSIUOG00005023749	lncRNA gene	Chr17:53810969-53825560 (-)

Homology

• Gene Tree
  Gm11110
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Targeted
  1
• Incidental Mutations
  APF
• Find Mice (IMSR)
  7 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  6

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  36
• RefSeq
  1
• UniProt
  1

• Ensembl
  ENSMUSG00000079414 (Evidence)
• NCBI Gene
  100169874

Representative Sequences			Length	Strain/Species
genomic	100169874	NCBI Gene Model | MGI Sequence Detail	13920	C57BL/6J
transcript	NR_033508	RefSeq | MGI Sequence Detail	1026	C57BL/6
polypeptide	Q3U4K9	UniProt | EBI | MGI Sequence Detail	109	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 6

  cDNA 6

  
  

  Microarray probesets 2

References

• Summaries
  All 11

  Phenotypes 1
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm11110:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr148901	Chr17:57412916-57412948 (-)	10 bp