Vmn2r-ps133 Pseudogene Detail

Summary

• Symbol
  Vmn2r-ps133
• Name
  vomeronasal 2, receptor, pseudogene 133
• Synonyms
  EG638056

• Feature Type
  pseudogene
• IDs
  MGI:3761693
  NCBI Gene: 638056
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:23460642-23496152 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, 11.56 cM
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  765 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3761693	pseudogene	Chr17:23460624-23496152 (-)
129S1/SvImJ	ENSMUSG00200039182	pseudogene	Chr17:18897790-18928367 (-)
A/J	ENSMUSG00195039494	pseudogene	Chr17:19915973-19946552 (-)
AKR/J	ENSMUSG00220029737	pseudogene	Chr17:18956888-18992427 (-)
BALB/cJ	ENSMUSG00180019830	pseudogene	Chr17:19198578-19229155 (-)
C3H/HeJ	ENSMUSG00175045078	pseudogene	Chr17:18971639-19007180 (-)
C57BL/6NJ	ENSMUSG00215043548	pseudogene	Chr17:18953421-19003830 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0037181	pseudogene	Chr17:19091363-19116042 (-)
CAST/EiJ	ENSTCUG00005023962	pseudogene	Chr17:19544379-19572129 (-)
CBA/J	ENSMUSG00210045123	pseudogene	Chr17:18806702-18842239 (-)
DBA/2J	ENSMUSG00185055431	pseudogene	Chr17:21004821-21035396 (-)
FVB/NJ	ENSMUSG00205036759	pseudogene	Chr17:19343385-19376602 (-)
JF1/MsJ	ENSUMUG00000057521	pseudogene	Chr17:20451352-20481903 (-)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190043894	pseudogene	Chr17:18885563-18924552 (-)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010021739	pseudogene	Chr17:18395751-18433333 (-)
SPRET/EiJ	ENSMSPG00010041659	pseudogene	Chr17:19802190-19830133 (-)
WSB/EiJ	ENSIUOG00005043229	pseudogene	Chr17:19638603-19669168 (-)

Homology

• Gene Tree
  Vmn2r-ps133
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  16 phenotype references
  

• All Mutations and Alleles
  1
• Spontaneous
  1
• Genomic Mutations
  1 involving Vmn2r-ps133
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000093493 (Evidence)
• NCBI Gene
  638056

Representative Sequences			Length	Strain/Species
genomic	638056	NCBI Gene Model | MGI Sequence Detail	35511	C57BL/6J

Other
Accession IDs

MGI:3645879

References

• Summaries
  All 22

  Phenotypes 16
• Earliest
  J:84774 Dunn LC, Studies of the genetic variability in populations of wild house mice. II. Analysis of eight additional alleles at locus T. Genetics. 1957;42:299-311
• Latest
  J:273736 Charron Y, et al., Two isoforms of the RAC-specific guanine nucleotide exchange factor TIAM2 act oppositely on transmission ratio distortion by the mouse t-haplotype. PLoS Genet. 2019 Feb;15(2):e1007964