Vmn2r-ps123 Pseudogene Detail

Summary

• Symbol
  Vmn2r-ps123
• Name
  vomeronasal 2, receptor, pseudogene 123
• Synonyms
  Gm4765

• Feature Type
  pseudogene
• IDs
  MGI:3761608
  NCBI Gene: 210465
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:20058827-20094468 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, 11.40 cM
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  1474 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3761608	pseudogene	Chr17:20058827-20094618 (+)
129S1/SvImJ	ENSMUSG00200038953	pseudogene	Chr17:15502527-15538375 (+)
A/J	ENSMUSG00195038031	pseudogene	Chr17:16390338-16426186 (+)
AKR/J	ENSMUSG00220027861	pseudogene	Chr17:15706462-15742213 (+)
BALB/cJ	ENSMUSG00180018965	pseudogene	Chr17:15687117-15722965 (+)
C3H/HeJ	ENSMUSG00175043121	pseudogene	Chr17:15551188-15586833 (+)
C57BL/6NJ	ENSMUSG00215043575	pseudogene	Chr17:15527739-15563382 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005023911	pseudogene	Chr17:16085671-16125926 (+)
CBA/J	ENSMUSG00210043744	pseudogene	Chr17:15359113-15394760 (+)
DBA/2J	ENSMUSG00185041619	pseudogene	Chr17:17524533-17560380 (+)
FVB/NJ	ENSMUSG00205036305	pseudogene	Chr17:16012029-16047784 (+)
JF1/MsJ	ENSUMUG00000041632	pseudogene	Chr17:16703532-16739624 (+)
LP/J	ENSMUSG00230027062	pseudogene	Chr17:18922594-18958441 (+)
NOD/ShiLtJ	ENSMUSG00190044326	pseudogene	Chr17:15745537-15781182 (+)
NZO/HlLtJ	ENSMUSG00225054724	pseudogene	Chr17:20876293-20912140 (+)
PWK/PhJ	ENSLUMG00010020886	pseudogene	Chr17:14994972-15031058 (+)
SPRET/EiJ	ENSMSPG00010041936	pseudogene	Chr17:16460585-16470685 (-)
WSB/EiJ	ENSIUOG00005041336	pseudogene	Chr17:16287527-16323380 (+)

Homology

• Gene Tree
  Vmn2r-ps123
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  16 phenotype references
  

• All Mutations and Alleles
  1
• Spontaneous
  1
• Genomic Mutations
  1 involving Vmn2r-ps123
• Find Mice (IMSR)
  1 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000093426 (Evidence)
• NCBI Gene
  210465

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000093426	Ensembl Gene Model | MGI Sequence Detail	35642	C57BL/6J
transcript	ENSMUST00000176763	Ensembl | MGI Sequence Detail	2410	Not Applicable

Other
Accession IDs

MGI:3645527

References

• Summaries
  All 23

  Phenotypes 16
• Earliest
  J:84774 Dunn LC, Studies of the genetic variability in populations of wild house mice. II. Analysis of eight additional alleles at locus T. Genetics. 1957;42:299-311
• Latest
  J:273736 Charron Y, et al., Two isoforms of the RAC-specific guanine nucleotide exchange factor TIAM2 act oppositely on transmission ratio distortion by the mouse t-haplotype. PLoS Genet. 2019 Feb;15(2):e1007964