Vmn2r-ps120 Pseudogene Detail

Summary

• Symbol
  Vmn2r-ps120
• Name
  vomeronasal 2, receptor, pseudogene 120
• Synonyms
  Gm6761

• Feature Type
  pseudogene
• IDs
  MGI:3761538
  NCBI Gene: 100503875
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:19499584-19524740 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, 11.40 cM
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  236 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3761538	pseudogene	Chr17:19499584-19524909 (+)
129S1/SvImJ	ENSMUSG00200039446	pseudogene	Chr17:14940036-14965218 (+)
A/J	ENSMUSG00195037682	pseudogene	Chr17:15827821-15853001 (+)
AKR/J	ENSMUSG00220027037	pseudogene	Chr17:15162358-15187516 (+)
BALB/cJ	ENSMUSG00180018284	pseudogene	Chr17:15124574-15149760 (+)
C3H/HeJ	ENSMUSG00175041665	pseudogene	Chr17:14988561-15013717 (+)
C57BL/6NJ	ENSMUSG00215043861	pseudogene	Chr17:14965401-14990564 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0037501	pseudogene	ChrX:42282580-42307923 (-)
CAST/EiJ	ENSTCUG00005023684	pseudogene	Chr17:15474437-15499702 (+)
CBA/J	ENSMUSG00210044559	pseudogene	Chr17:14796480-14821638 (+)
DBA/2J	ENSMUSG00185042195	pseudogene	Chr17:16962014-16987201 (+)
FVB/NJ	ENSMUSG00205035814	pseudogene	Chr17:15416725-15441892 (+)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230027347	pseudogene	Chr17:18360132-18385309 (+)
NOD/ShiLtJ	ENSMUSG00190044168	pseudogene	Chr17:15183250-15208414 (+)
NZO/HlLtJ	ENSMUSG00225054790	pseudogene	Chr17:20313810-20338992 (+)
PWK/PhJ	no annotation
SPRET/EiJ	ENSMSPG00010041174	pseudogene	Chr17:16003614-16024099 (+)
WSB/EiJ	ENSIUOG00005042412	pseudogene	Chr17:15725173-15750357 (+)

Homology

• Gene Tree
  Vmn2r-ps120
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  16 phenotype references
  

• All Mutations and Alleles
  1
• Spontaneous
  1
• Genomic Mutations
  1 involving Vmn2r-ps120
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000093776 (Evidence)
• NCBI Gene
  100503875

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000093776	Ensembl Gene Model | MGI Sequence Detail	25157	C57BL/6J
transcript	ENSMUST00000176341	Ensembl | MGI Sequence Detail	2409	Not Applicable

Other
Accession IDs

MGI:3642988

References

• Summaries
  All 23

  Phenotypes 16
• Earliest
  J:84774 Dunn LC, Studies of the genetic variability in populations of wild house mice. II. Analysis of eight additional alleles at locus T. Genetics. 1957;42:299-311
• Latest
  J:273736 Charron Y, et al., Two isoforms of the RAC-specific guanine nucleotide exchange factor TIAM2 act oppositely on transmission ratio distortion by the mouse t-haplotype. PLoS Genet. 2019 Feb;15(2):e1007964