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Vmn2r127 Pseudogene Detail
Summary
  • Symbol
    Vmn2r127
  • Name
    vomeronasal 2 receptor 127
  • Synonyms
    EG665344, Vmn2r-ps119
Location &
Maps
more
  • Sequence Map
    Chr17:19361730-19397004 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, 11.40 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    235 from dbSNP Build 142
  • Strain Annotations
    15
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3761537
 polymorphic pseudogene Chr17:19361730-19397018 (+)
129S1/SvImJ MGP_129S1SvImJ_G0040114
 pseudogene Chr17:16092136-16548292 (+)
A/J MGP_AJ_G0040115
 pseudogene Chr17:16551537-16995633 (+)
AKR/J MGP_AKRJ_G0040039
 pseudogene Chr17:16669627-17080610 (+)
BALB/cJ MGP_BALBcJ_G0040097
 pseudogene Chr17:16719637-17187776 (+)
C3H/HeJ MGP_C3HHeJ_G0039748
 pseudogene Chr17:16923012-17408360 (+)
C57BL/6NJ MGP_C57BL6NJ_G0040692
 pseudogene Chr17:18216672-18250255 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0038836
 pseudogene Chr17:15921003-16889073 (+)
CBA/J MGP_CBAJ_G0039713
 pseudogene Chr17:18480533-18948538 (+)
DBA/2J MGP_DBA2J_G0039906
 pseudogene Chr17:15979120-16699785 (+)
FVB/NJ MGP_FVBNJ_G0039867
 pseudogene Chr17:15758406-16607610 (+)
LP/J MGP_LPJ_G0039955
 pseudogene Chr17:16053920-16513276 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0039857
 pseudogene Chr17:17963834-18778466 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0040785
 pseudogene Chr17:17240223-17278291 (+)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0039063
 pseudogene Chr17:16332730-17521646 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    16 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    21
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 665344 NCBI Gene Model | MGI Sequence Detail 35275 C57BL/6J ±  kb
polypeptide A0A3Q4L333 UniProt | EBI | MGI Sequence Detail 296 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR000337 GPCR, family 3
    IPR000068 GPCR, family 3, extracellular calcium-sensing receptor-related
    IPR028082 Periplasmic binding protein-like I
    IPR001828 Receptor, ligand binding region
Other
Accession IDs
less
MGI:3647259
References
more
  • Summaries
    All 23
    Phenotypes 16
  • Earliest
    J:84774 Dunn LC, Studies of the genetic variability in populations of wild house mice. II. Analysis of eight additional alleles at locus T. Genetics. 1957;42:299-311
  • Latest
    J:273736 Charron Y, et al., Two isoforms of the RAC-specific guanine nucleotide exchange factor TIAM2 act oppositely on transmission ratio distortion by the mouse t-haplotype. PLoS Genet. 2019 Feb;15(2):e1007964
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory