Vmn2r-ps96 Pseudogene Detail

Summary

• Symbol
  Vmn2r-ps96
• Name
  vomeronasal 2, receptor, pseudogene 96
• Synonyms
  Gm7777

• Feature Type
  pseudogene
• IDs
  MGI:3761348
  NCBI Gene: 665767
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:65569450-65583352 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 34.48 cM
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  33 from dbSNP Build 142
• Strain Annotations
  29

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3761348	pseudogene	Chr13:65569449-65583353 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	ENSMUSG00180030080	pseudogene	Chr13:62235269-62249173 (-)
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	ENSMUSG00185010701	pseudogene	Chr13:65240329-65253509 (+)
DBA/2J	ENSMUSG00185010559	pseudogene	Chr13:64601791-64615694 (+)
DBA/2J	ENSMUSG00185010730	pseudogene	Chr13:65562081-65575981 (+)
DBA/2J	ENSMUSG00185010647	pseudogene	Chr13:65026723-65040666 (-)
DBA/2J	ENSMUSG00185010318	pseudogene	Chr13:63239206-63260493 (-)
DBA/2J	ENSMUSG00185009820	pseudogene	Chr13:63765934-63779833 (-)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000041074	pseudogene	Chr13:63711475-63725402 (+)
JF1/MsJ	ENSUMUG00000034905	pseudogene	Chr13:62639925-62653829 (-)
LP/J	ENSMUSG00230035385	pseudogene	Chr13:72264494-72281470 (-)
LP/J	ENSMUSG00230035409	pseudogene	Chr13:72577349-72591248 (-)
LP/J	ENSMUSG00230035555	pseudogene	Chr13:73097758-73111657 (-)
LP/J	ENSMUSG00230035170	pseudogene	Chr13:73165005-73178914 (-)
LP/J	ENSMUSG00230035732	pseudogene	Chr13:73873478-73887385 (+)
LP/J	ENSMUSG00230035840	pseudogene	Chr13:74275231-74289180 (-)
LP/J	ENSMUSG00230035869	pseudogene	Chr13:74488836-74502019 (+)
LP/J	ENSMUSG00230035986	pseudogene	Chr13:75711989-75725891 (+)
NOD/ShiLtJ	ENSMUSG00190041968	pseudogene	Chr13:61849305-61853626 (+)
NZO/HlLtJ	ENSMUSG00225048383	pseudogene	Chr13:65987520-66004498 (-)
NZO/HlLtJ	ENSMUSG00225048409	pseudogene	Chr13:66056031-66073009 (-)
NZO/HlLtJ	ENSMUSG00225048215	pseudogene	Chr13:67437768-67451717 (-)
NZO/HlLtJ	ENSMUSG00225048426	pseudogene	Chr13:66191192-66205098 (-)
NZO/HlLtJ	ENSMUSG00225048537	pseudogene	Chr13:67651351-67664534 (+)
NZO/HlLtJ	ENSMUSG00225048566	pseudogene	Chr13:67973373-67987276 (+)
NZO/HlLtJ	ENSMUSG00225048491	pseudogene	Chr13:66793342-66807256 (+)
PWK/PhJ	ENSLUMG00010013041	pseudogene	Chr13:61382494-61396385 (-)
SPRET/EiJ	ENSMSPG00010035035	pseudogene	Chr13:61872346-61886295 (-)
WSB/EiJ	ENSIUOG00005024629	pseudogene	Chr13:61089994-61103941 (-)

Homology

• Gene Tree
  Vmn2r-ps96
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Vmn2r-ps96
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  34
• RefSeq
  2

• Ensembl
  ENSMUSG00000114065 (Evidence)
• NCBI Gene
  665767

Representative Sequences			Length	Strain/Species
genomic	665767	NCBI Gene Model | MGI Sequence Detail	13903	C57BL/6J

Other
Accession IDs

MGI:3646052

References

• Summaries
  All 9

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
• Latest
  J:125082 Young JM, et al., V2R gene families degenerated in primates, dog and cow, but expanded in opossum. Trends Genet. 2007 May;23(5):212-5