Vmn2r-ps94 Pseudogene Detail

Summary

• Symbol
  Vmn2r-ps94
• Name
  vomeronasal 2, receptor, pseudogene 94

• Feature Type
  pseudogene
• IDs
  MGI:3761346
  NCBI Gene: 619864
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:33950975-33995593 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 13.96 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  835 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3761346	pseudogene	Chr13:33950903-33995593 (+)
129S1/SvImJ	ENSMUSG00200013386	pseudogene	Chr13:31146715-31191396 (+)
A/J	ENSMUSG00195040102	pseudogene	Chr13:30236302-30280981 (+)
AKR/J	ENSMUSG00220013519	pseudogene	Chr13:30022486-30070252 (+)
BALB/cJ	ENSMUSG00180008349	pseudogene	Chr13:30536435-30581114 (+)
C3H/HeJ	ENSMUSG00175013370	pseudogene	Chr13:30489408-30534089 (+)
C57BL/6NJ	ENSMUSG00215013380	pseudogene	Chr13:30670231-30714914 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210012092	pseudogene	Chr13:30502192-30546873 (+)
DBA/2J	ENSMUSG00185033687	pseudogene	Chr13:31321318-31366000 (+)
FVB/NJ	ENSMUSG00205031429	pseudogene	Chr13:30203437-30247342 (+)
JF1/MsJ	ENSUMUG00000040447	pseudogene	Chr13:30927814-30967693 (+)
LP/J	ENSMUSG00230015292	pseudogene	Chr13:40645793-40690472 (+)
NOD/ShiLtJ	ENSMUSG00190012199	pseudogene	Chr13:30727295-30771974 (+)
NZO/HlLtJ	ENSMUSG00225035238	pseudogene	Chr13:34461440-34506122 (+)
PWK/PhJ	ENSLUMG00010032628	pseudogene	Chr13:29763612-29803461 (+)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005017204	pseudogene	Chr13:29939180-29940117 (+)

Homology

• Gene Tree
  Vmn2r-ps94
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Vmn2r-ps94
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  1

• Ensembl
  ENSMUSG00000080317 (Evidence)
• NCBI Gene
  619864

Representative Sequences			Length	Strain/Species
genomic	619864	NCBI Gene Model | MGI Sequence Detail	44619	C57BL/6J

Other
Accession IDs

MGI:3649837

References

• Summaries
  All 10

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
• Latest
  J:125082 Young JM, et al., V2R gene families degenerated in primates, dog and cow, but expanded in opossum. Trends Genet. 2007 May;23(5):212-5