Vmn2r-ps92 Pseudogene Detail

Summary

• Symbol
  Vmn2r-ps92
• Name
  vomeronasal 2, receptor, pseudogene 92

• Feature Type
  pseudogene
• IDs
  MGI:3761345
  NCBI Gene: 100124575
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:78389885-78390251 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 39.72 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  126 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3761345	pseudogene	Chr10:78389849-78390251 (+)
129S1/SvImJ	ENSMUSG00200050454	pseudogene	Chr10:75067981-75068368 (+)
A/J	ENSMUSG00195049637	pseudogene	Chr10:75404681-75405068 (+)
AKR/J	ENSMUSG00220048773	pseudogene	Chr10:75064350-75064737 (+)
BALB/cJ	ENSMUSG00180053003	pseudogene	Chr10:75419046-75419433 (+)
C3H/HeJ	ENSMUSG00175052902	pseudogene	Chr10:75290150-75290537 (+)
C57BL/6NJ	ENSMUSG00215053339	pseudogene	Chr10:75027916-75028303 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005051719	pseudogene	Chr10:74920220-74920609 (+)
CBA/J	ENSMUSG00210050207	pseudogene	Chr10:75146275-75146662 (+)
DBA/2J	ENSMUSG00185053391	pseudogene	Chr10:75488638-75489025 (+)
FVB/NJ	ENSMUSG00205052301	pseudogene	Chr10:75180666-75181053 (+)
JF1/MsJ	ENSUMUG00000056019	pseudogene	Chr10:76653726-76654115 (+)
LP/J	ENSMUSG00230051478	pseudogene	Chr10:77258069-77258456 (+)
NOD/ShiLtJ	ENSMUSG00190052778	pseudogene	Chr10:75466041-75466428 (+)
NZO/HlLtJ	ENSMUSG00225047678	pseudogene	Chr10:81544965-81545352 (+)
PWK/PhJ	ENSLUMG00010051359	pseudogene	Chr10:75032001-75032390 (+)
SPRET/EiJ	ENSMSPG00010048150	pseudogene	Chr10:76830033-76830422 (+)
WSB/EiJ	ENSIUOG00005051982	pseudogene	Chr10:75080696-75081078 (+)

Homology

• Gene Tree
  Vmn2r-ps92
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Vmn2r-ps92
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000111881 (Evidence)
• NCBI Gene
  100124575

Representative Sequences			Length	Strain/Species
genomic	100124575	NCBI Gene Model | MGI Sequence Detail	367	C57BL/6J

References

• Summaries
  All 9

  Phenotypes 5
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:125082 Young JM, et al., V2R gene families degenerated in primates, dog and cow, but expanded in opossum. Trends Genet. 2007 May;23(5):212-5