Vmn2r-ps68 Pseudogene Detail

Summary

• Symbol
  Vmn2r-ps68
• Name
  vomeronasal 2, receptor, pseudogene 68
• Synonyms
  EG620683

• Feature Type
  pseudogene
• IDs
  MGI:3761309
  NCBI Gene: 620683
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:84841405-84842265 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 48.40 cM
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  158 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3761309	pseudogene	Chr7:84841405-84842376 (+)
129S1/SvImJ	ENSMUSG00200028143	pseudogene	Chr7:71662022-71662882 (+)
A/J	ENSMUSG00195043397	pseudogene	Chr7:76116766-76117626 (+)
AKR/J	ENSMUSG00220042105	pseudogene	Chr7:69653366-69654226 (+)
BALB/cJ	ENSMUSG00180038858	pseudogene	Chr7:72822321-72823181 (+)
C3H/HeJ	ENSMUSG00175038392	pseudogene	Chr7:73555481-73556341 (+)
C57BL/6NJ	ENSMUSG00215033993	pseudogene	Chr7:72676701-72677561 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210043296	pseudogene	Chr7:73423844-73424704 (+)
DBA/2J	ENSMUSG00185047320	pseudogene	Chr7:77730615-77731475 (+)
FVB/NJ	ENSMUSG00205035836	pseudogene	Chr7:73373221-73374081 (+)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230017125	pseudogene	Chr7:83818411-83819271 (+)
NOD/ShiLtJ	ENSMUSG00190033036	pseudogene	Chr7:73587105-73587965 (+)
NZO/HlLtJ	ENSMUSG00225011391	pseudogene	Chr7:82093323-82094183 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005034698	pseudogene	Chr7:73918057-73918917 (+)

Homology

• Gene Tree
  Vmn2r-ps68
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  24 phenotype references
  

• All Mutations and Alleles
  4
• Chemically induced (other)
  1
• Radiation induced
  3
• Genomic Mutations
  4 involving Vmn2r-ps68
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18
• RefSeq
  1

• Ensembl
  ENSMUSG00000092259 (Evidence)
• NCBI Gene
  620683

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000092259	Ensembl Gene Model | MGI Sequence Detail	861	C57BL/6J
transcript	ENSMUST00000173880	Ensembl | MGI Sequence Detail	861	Not Applicable

Other
Accession IDs

MGI:3645101

References

• Summaries
  All 30

  Phenotypes 24
• Earliest
  J:141526 Russell LB, et al., Analysis of the albino-locus region of the mouse. III. Time of death of prenatal lethals. Genetics. 1979 May;92(1):205-13
• Latest
  J:125082 Young JM, et al., V2R gene families degenerated in primates, dog and cow, but expanded in opossum. Trends Genet. 2007 May;23(5):212-5