Vmn2r-ps66 Pseudogene Detail

Summary

• Symbol
  Vmn2r-ps66
• Name
  vomeronasal 2, receptor, pseudogene 66
• Synonyms
  EG620641

• Feature Type
  pseudogene
• IDs
  MGI:3758012
  NCBI Gene: 620641
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:84702283-84720142 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 48.39 cM
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  693 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3758012	pseudogene	Chr7:84702283-84720145 (+)
129S1/SvImJ	ENSMUSG00200028169	pseudogene	Chr7:71528206-71545631 (+)
A/J	ENSMUSG00195043480	pseudogene	Chr7:75986005-76003433 (+)
AKR/J	ENSMUSG00220042206	pseudogene	Chr7:69522609-69540035 (+)
BALB/cJ	ENSMUSG00180038952	pseudogene	Chr7:72691578-72709001 (+)
C3H/HeJ	ENSMUSG00175038492	pseudogene	Chr7:73421663-73439088 (+)
C57BL/6NJ	ENSMUSG00215034174	pseudogene	Chr7:72537584-72555446 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005045779	pseudogene	Chr7:75971785-75989252 (+)
CBA/J	ENSMUSG00210043408	pseudogene	Chr7:73290023-73307448 (+)
DBA/2J	ENSMUSG00185047470	pseudogene	Chr7:77596798-77614223 (+)
FVB/NJ	ENSMUSG00205036051	pseudogene	Chr7:73242460-73259885 (+)
JF1/MsJ	ENSUMUG00000020617	pseudogene	Chr7:82283600-82300126 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190033204	pseudogene	Chr7:73450005-73467430 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010039218	pseudogene	Chr7:71889330-71907662 (+)
SPRET/EiJ	ENSMSPG00010013238	pseudogene	Chr7:72331184-72351138 (+)
WSB/EiJ	ENSIUOG00005034761	pseudogene	Chr7:73785316-73803184 (+)

Homology

• Gene Tree
  Vmn2r-ps66
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  24 phenotype references
  

• All Mutations and Alleles
  4
• Chemically induced (other)
  1
• Radiation induced
  3
• Genomic Mutations
  4 involving Vmn2r-ps66
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  1

• Ensembl
  ENSMUSG00000092621 (Evidence)
• NCBI Gene
  620641

Representative Sequences			Length	Strain/Species
genomic	620641	NCBI Gene Model | MGI Sequence Detail	17860	C57BL/6J

Other
Accession IDs

MGI:3646297

References

• Summaries
  All 30

  Phenotypes 24
• Earliest
  J:141526 Russell LB, et al., Analysis of the albino-locus region of the mouse. III. Time of death of prenatal lethals. Genetics. 1979 May;92(1):205-13
• Latest
  J:125082 Young JM, et al., V2R gene families degenerated in primates, dog and cow, but expanded in opossum. Trends Genet. 2007 May;23(5):212-5