Vmn2r-ps6 Pseudogene Detail

Summary

• Symbol
  Vmn2r-ps6
• Name
  vomeronasal 2, receptor, pseudogene 6

• Feature Type
  pseudogene
• IDs
  MGI:3757678
  NCBI Gene: 100124548
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:64344397-64345705 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 30.15 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  54 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3757678	pseudogene	Chr3:64344304-64345708 (-)
129S1/SvImJ	ENSMUSG00200001685	pseudogene	Chr3:61269273-61270679 (-)
A/J	ENSMUSG00195027232	pseudogene	Chr3:61210287-61211693 (-)
AKR/J	ENSMUSG00220025417	pseudogene	Chr3:61229630-61231034 (-)
BALB/cJ	ENSMUSG00180008617	pseudogene	Chr3:61253945-61255349 (-)
C3H/HeJ	ENSMUSG00175003782	pseudogene	Chr3:61096758-61098162 (-)
C57BL/6NJ	ENSMUSG00215007340	pseudogene	Chr3:61553763-61555167 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210002257	pseudogene	Chr3:61212639-61214045 (-)
DBA/2J	ENSMUSG00185015652	pseudogene	Chr3:61383016-61384422 (-)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000003067	pseudogene	Chr3:61074669-61076075 (-)
LP/J	ENSMUSG00230002540	pseudogene	Chr3:63405843-63407247 (-)
NOD/ShiLtJ	ENSMUSG00190003205	pseudogene	Chr3:61637609-61639013 (-)
NZO/HlLtJ	ENSMUSG00225002527	pseudogene	Chr3:66013861-66015273 (-)
PWK/PhJ	ENSLUMG00010005773	pseudogene	Chr3:61085534-61086900 (-)
PWK/PhJ	ENSLUMG00010005539	pseudogene	Chr3:60924076-60925490 (-)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005016631	pseudogene	Chr3:61444187-61445591 (-)

Homology

• Gene Tree
  Vmn2r-ps6
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Vmn2r-ps6
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  1

• Ensembl
  ENSMUSG00000093395 (Evidence)
• NCBI Gene
  100124548

Representative Sequences			Length	Strain/Species
genomic	100124548	NCBI Gene Model | MGI Sequence Detail	1309	C57BL/6J

References

• Summaries
  All 9

  Diseases 1

  Phenotypes 4
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426